AGU24 - EP11D-1300 - Revisiting Megacusp Embayment Occurrence in Monterey Bay and Beyond: High Spatiotemporal Resolution Satellite Imagery Provides New Insight into the Wave Condit... by Kelby Kramer (20706767)

“…D., Vos, K., & Splinter, K. D. (2022). A Python toolkit to monitor sandy shoreline change using high-resolution PlanetScope cubesats. …”

Methodological Approach Based on Structural Parameters, Vibrational Frequencies, and MMFF94 Bond Charge Increments for Platinum-Based Compounds by Gloria Castañeda-Valencia (20758502)

“…The developed bci optimization tool, based on MMFF94, was implemented using a Python code made available at https://github.com/molmodcs/bci_solver. …”

Building footprtints from 1970s Hexagon spy satellite images for four global urban growth hotspots by Franz Schug (10165159)

“…</p> <p><strong>Processing environment</strong></p> <p>This research has been conducted using Python for ESRI ArcGIS Pro version 3.2.1 and the TensorFlow package. …”

GeoGraphNetworks: Shapefile-Derived Datasets for Accurate and Scalable Graphical Representations by Harish Sharma (18881935)

“…</p><p dir="ltr">The JSON files contain graph objects created using the widely used Python library NetworkX, allowing for immediate use without the need for pre-processing. …”

Behavioural machine activity for benign and malicious Win7 64-bit executables by Peter Burnap (19078697)

“…</li></ul><p><br></p><p><strong>Dataset 2:</strong></p><ul><li>filename = "data_2.csv"</li><li>2345 benign samples </li><li>2286 malicious samples</li><li>Up to 20 seconds execution per file</li><li>The data was collected in a VirtualBox[1] virtual machine using Cuckoo Sandbox[2] with a custom package written in the python library, Psutil[4] to collect the machine activity data. …”

PepENS by Abel Chandra (16854753)

“…To run the tool, execute the script PepENS_user.py (located in the Dataset1 directory). Before using the tool, users must generate three types of features: the PSSM (see <a href="https://www.ncbi.nlm.nih.gov/books/NBK2590/" rel="nofollow" target="_blank">PSI-BLAST tutorial</a>), the Transformer embeddings (see <a href="https://github.com/agemagician/ProtTrans" target="_blank">ProtTrans usage guide</a>), and the HSE features (via <a href="https://github.com/biopython/biopython/blob/master/Scripts/PDB/hsexpo.py" target="_blank">hsexpo program</a> with Exposure Types CN, HSEBD, and HSEBU). …”

USDA-ARS Tucson, Arizona 2014-2022 Data Reservoir of Field Experiments with Managed Honey Bee Colonies: Annotated Hive Frame Photos: Dataset I by Vladimir Kulyukin (21983990)

“…</p><p dir="ltr">SRC/ also contains the following Python scripts that we used for training YOLO networks:</p><p dir="ltr">(a) train_valid_split.py -- splits all alldata.txt in USDA_ARZ_DATA_YOLO_19june2025.zip into train.txt and valid.txt for YOLO training.…”

Automatically Generated Chemical KG by Connor Oryan (19851477)

“…The files are in JSON format and are intended to be loaded within Python as dictionaries. The <i>Full_SSKG.json </i>file is approximately 11GB in size when extracted. …”

100-m resolution Age-Stratified Population Estimation from the 2020 China Census by Township (ASPECT) by Yang Ju (12472821)

“…Once uncompressed, the GEOTIFF files can processed by GIS software such as ArcGIS, and by programing language packages such as Rasterio in Python.…”

<b>Visium spatial transcriptomics data for individual oral squamous cell carcinoma (OSCC) patients</b> by Ken Furudate (13018584)

“…</li><li>Supplementary spatial metadata components (pickled Python objects) for use with the integrated AnnData object are available at Figshare (<a href="https://doi.org/10.6084/m9.figshare.20408067" rel="noopener" target="_blank">https://doi.org/10.6084/m9.figshare.20408067</a>).…”

data for PONE-D-25-41664 by Ying Song (22646597)

“…Software Requirements</p><p dir="ltr">This dataset is provided in .xlsx format and can be opened with:</p><p><br></p><p dir="ltr">Statistical software: R, Stata, Python (pandas)</p><p dir="ltr">Spreadsheet programs: Microsoft Excel, Google Sheets, LibreOffice Calc</p><p><br></p><p dir="ltr">8. …”

Cerebellum cell type collaboration database by Maxime Beau (7092260)

“…url=https://en.wikipedia.org/wiki/Hierarchical_Data_Format&data=05|02|christine.buckley@ucl.ac.uk|38143a9b01cd4bf12d3608dd5a5ed511|1faf88fea9984c5b93c9210a11d9a5c2|0|0|638766085530777814|Unknown|TWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ==|0|||&sdata=un5vN2R7ugo2Fv43yXXJKZep9Q2Jlyck9+gN5Pm3Qt0=&reserved=0" target="_blank">Hdf5</a> files can be easily opened with Python, MATLAB and many other programming languages.…”