Genomic Surveillance of Pemivibart (VYD2311) Escape-Associated Mutations in SARS-CoV-2: December 2025 BioSamples (n=2) حسب Tahir Bhatti (20961974)

"…Full source code and version details are available upon request.…"

Sonification of Warming Stripes حسب Christopher Harrison (9448751)

"…The sonification was produced using the STRAUSS sonification Python package.</p><p dir="ltr">Here we release:<br>1. …"

Morphological profiles of U-2 OS cells with cDNA-mediated overexpression حسب Jesko Wagner (19934877)

"…<a href="https://doi.org/10/ghkrp7" target="_blank">https://doi.org/10/ghkrp7</a></p><p><br></p><p dir="ltr">The data provided here has been reprocessed by combining data from the provided sqlite databases and csv files into a <code>h5ad</code> AnnData file, which can be read in with the AnnData Python package (<a href="https://anndata.readthedocs.io" rel="noreferrer" target="_blank">documentation available here</a>).…"

Overview of generalized weighted averages. حسب Nobuhito Manome (8882084)

"…The code is available at <a href="https://github.com/manome/python-mab" target="_blank">https://github.com/manome/python-mab</a>.…"

Pteredactyl: Patient Clinical Free-Text Redaction Software حسب Matt Stammers (14037525)

"…</p><p dir="ltr">This is why we created <a href="https://pypi.org/project/pteredactyl/" rel="noopener noreferrer" target="_blank">Pteredactyl</a> - a python module to help with redaction of clinical free text.…"

Sonification of Growing Black Hole حسب Rose Shepherd (20328444)

"…We used the open source Python package STRAUSS to produce the sonification (Trayford and Harrison 2023). …"

FORCE11: FROGS: Facilitating Reproducible Open (Geo)Science حسب Deborah Khider (4673140)

Genomic Epidemiology of SARS-CoV-2 in Peru from 2020 to 2024 حسب Pablo Tsukayama (22614461)

"…<p dir="ltr">This dataset compiles all code, scripts, supporting files, and figure outputs used for the analyses presented in Sobkowiak et al., Genomic Epidemiology of SARS-CoV-2 in Peru, 2020–2024 (Communications Medicine, 2025). …"

Influence of vibrational motion and temperature on Interatomic Coulombic electron capture - Dataset حسب Elena M. Jahr (16313754)

"…The python libraries <code>matplotlib</code>, <code>numpy</code> and <code>scipy</code> are needed.…"

ML model for prediction of postpartum rehospitalization in pregnant women/new mothers using readily obtainable pre-pregnancy or early pregnancy sociodemographic and health determin... حسب Martin Frasch (5754731)

"…</li><li>This model delivers a 3,492% ROI over 5 years with $325,080 annual net benefit per 10,000 deliveries in the U.S.A.</li><li>Here, we present an open-access Python code including the ML model for inference to facilitate prospective utilization of the developed model and further study of the nuMoM2b and similar datasets with machine learning approaches.…"

Endothelial cells stably infected with recombinant Kaposi’s sarcoma-associated herpesvirus display distinct viscoelastic and morphological properties حسب Majahonkhe Shabangu (17340538)

"…<p dir="ltr">Data and code supporting work presented in article.</p><p dir="ltr">File: 01_preprocessing_macro.ijm</p><p dir="ltr">Description: A simplified macro outlining time-lapse image pre-processing prior to mitochondria-tracking analysis in TrackMate (Image J). …"

Data حسب Yasir Çatal (20329092)

"…Flexibility of Intrinsic Neural Timescales During Distinct Behavioral States<h2>Description of the data and file structure</h2><p dir="ltr">The github page <a href="https://github.com/duodenum96/acw_behavior" target="_blank">https://github.com/duodenum96/acwbehavior</a> contains the MATLAB code to replicate the figures. The numerical data necessary for the figures are presented here. …"

entity-poster.pdf حسب Evgeny Gorbunov (21771560)

"…<p dir="ltr">We update on status of development Entity Toolkit, a next-generation Particle-in-Cell (PIC) code designed to model plasmas in extreme astrophysical environments, such as black hole accretion disks and jets, neutron star magnetospheres, pulsar winds, and intracluster media. …"

Streamlining a National Flood Assessment using a Flow Scheduler حسب eRNZ Admin (6438486)

LNP drug delivery image data حسب Philip Harrison (8899735)

"…</div><div><br></div><div><u>Python code:</u></div><div><a href="https://github.com/pharmbio/phil_LNP_modelling">https://github.com/pharmbio/phil_LNP_modelling</a><br></div><div><br></div><div><br></div><div><br></div><div><br></div><div><br></div><p></p>…"

Learning States حسب Rui Varandas (11900993)

"…<br></p><p dir="ltr"><b>HCI features</b> encompass keyboard, mouse, and screenshot data. Below is a Python code snippet for extracting screenshot files from the screenshots CSV file.​…"

Replication Package: "The SBOM Gap: Adoption and Compliance in Open Source Software" حسب anonymous author (14191683)

"…<p dir="ltr">Replication Package Structure:</p><p dir="ltr">The replication package contains all data and scripts necessary to reproduce the analyses and results presented in this study.</p><p><br></p><p dir="ltr">replication_package/</p><p>│</p><p dir="ltr">├── data/</p><p dir="ltr">│ ├── sbom_repo_paths.csv # Repository paths and metadata for analyzed projects</p><p dir="ltr">│ ├── sbom_project_features.csv # Extracted features for SBOM projects</p><p dir="ltr">│ ├── non_sbom_project_features.csv # Extracted features for non-SBOM projects</p><p dir="ltr">│ └── SBOM_files/ # Raw SBOM files collected from selected repositories</p><p>│</p><p dir="ltr">└── code/</p><p dir="ltr"> ├── RQ1_regression/ # Scripts for regression analysis (RQ1)</p><p dir="ltr"> │ ├── regression.R # Main regression analysis script</p><p dir="ltr"> │ └── common.R # Shared functions for data filtering and formatting</p><p> │</p><p dir="ltr"> └── RQ2_compliance/ # Scripts for compliance and coverage checks (RQ2)</p><p dir="ltr"> ├── check_component_name.py</p><p dir="ltr"> ├── check_component_version.py</p><p dir="ltr"> ├── check_supplier.py</p><p dir="ltr"> ├── check_unique_identifiers.py</p><p dir="ltr"> ├── check_sbom_author.py</p><p dir="ltr"> ├── check_timestamp.py</p><p dir="ltr"> ├── check_dependency.py</p><p dir="ltr"> ├── check_hash.py</p><p dir="ltr"> ├── check_lifecycle_phase.py</p><p dir="ltr"> ├── check_license.py</p><p dir="ltr"> ├── check_vex.py</p><p dir="ltr"> ├── check_transitive_dependency.py</p><p dir="ltr"> ├── check_circular_dep.py</p><p dir="ltr"> └── check_all_7_min_req_files.py</p><p dir="ltr"><br></p><p dir="ltr"><br></p><p><br></p><p dir="ltr">Folder Descriptions:</p><p><br></p><p dir="ltr">data/: Contains datasets and raw SBOM files used in the analysis.…"

Neural-Signal Tokenization and Real-Time Contextual Foundation Modelling for Sovereign-Scale AGI Systems حسب Lakshit Mathur (20894549)

Supplementary Material to '<i>Mechanical instabilities and snapping phenomena in helical rods with perversion</i>' حسب Émilien Dilly (20415464)

"…</p><p dir="ltr"><b>Shooting calculation</b>: Shooting method, the Python code.</p><p dir="ltr"><b>Supplemental video 1</b>: Video illustrating a chirality inversion in the biphasic model, with plots in both the <i>(z,n)</i> and <i>(kappa,tau)</i> planes.…"

Supplementary materials to 'Critical phenomena in helical rods with perversion' حسب Émilien Dilly (20415464)

"…</p><p dir="ltr"><b>Shooting calculation</b>: Shooting method, the Python code.</p><p dir="ltr"><b>Supplemental video 1</b>: Video illustrating a chirality inversion in the biphasic model, with plots in both the <i>(z,n)</i> and <i>(kappa,tau)</i> planes.…"