Network-aware functional overrepresentation results. by Agatha Treveil (10090931)

HintCO – Hint-Based Configuration of Co-Simulations by Cláudio Gomes (8972050)

Preservation analysis of co-expressed modules of control networks were tested in the stress condition based on the median rank (A) and Zsummary (B) algorithms. by Bahman Panahi (7323578)

Subjects:

Code snippets to add user-specific custom functionality in PyNoetic. by Gursimran Singh (575288)

Subjects:

SARS-CoV-2 secondary structure predictions via KnotAli. by Luke Trinity (6792770)

Dominant SARS-CoV-2 pseudoknot motif predictions via Shapify. by Luke Trinity (6792770)

Python implementation from Symplectic decomposition from submatrix determinants by Jason L. Pereira (11598632)

“…Python implementation of the algorithm and demonstration of how to use the functions.…”

GraSPy: an Open Source Python Package for Statistical Connectomics by Benjamin Pedigo (6580352)

“…We developed GraSPy, an open-source Python toolkit for statistical inference on graphs. …”

Identification and functional analysis of hub genes. by Wei Ya Lan (22403712)

Development of the CO₂ Adsorption Model on Porous Adsorbent Materials Using Machine Learning Algorithms by Hossein Mashhadimoslem (11456548)

“…In this research study, we created a data set and collected data points from porous adsorbents (2789) from 21 published papers, including carbon-based, porous polymers, metal–organic frameworks (MOFs), and zeolites, to understand their characteristics for CO₂ adsorption. Different machine learning (ML) algorithms, such as NN, MLP-GWO, XGBoost, RF, DT, and SVM, have been applied to display the CO₂ adsorption performance as a function of characteristics and adsorption isotherm parameters. …”

Average Friedman test ranks (left) and pairwise average Wilcoxon signed-rank test p-values (right) for all compared optimization algorithms across CL, C17, C19, C21, C22, and RWPs. by Mahmood A. Jumaah (22272371)

Analysis of weighted co-expression networks in Parkinson’s disease. by Lixia Chen (614030)

Modular architecture design of PyNoetic showing all its constituent functions. by Gursimran Singh (575288)

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SARS-CoV-2 secondary structure motifs free energy per nt. by Luke Trinity (6792770)

Functional profiling of GS height <i>preserved</i> modules with cumulative evidence for genomic risk effect on co-expression. by Eugenia Radulescu (319733)

Functional profiling of GS-SCZ <i>preserved</i> modules with cumulative evidence for genomic risk effect on co-expression. by Eugenia Radulescu (319733)

Adaptive H-REMD simulation algorithm. by Danial Pourjafar-Dehkordi (7165523)

Parameters of muti-island genetic algorithm. by Shangyang Jin (21772466)

“…Thus, a combination algorithm optimization strategy for metamaterials in terms of multiple structural parameters is proposed in this paper based on a co-simulation approach. …”

The workflow used to analyze imbalanced and balanced sequences. by Solomon Shiferaw Beyene (9143178)

Performances of Naïve Bayes (NB), Multilayer Perceptron (MLP), Random Forest (RF), Gradient Boosting (GB), Support Vector Machine (SVM) and K- Nearest Neighbors (KNN). by Solomon Shiferaw Beyene (9143178)