A Python Package for the Localization of Protein Modifications in Mass Spectrometry Data حسب Anthony S. Barente (14035175)

الموضوعات:

Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements حسب Pascal Wang (10130612)

"…<div>This directory contains Python 3 scripts implementing the Trajectory Adaptive Multilevel Sampling algorithm (TAMS), a variant of Adaptive Multilevel Splitting (AMS), for the study of rare events. …"

Final solutions of a string problem for multiple algorithms runs. حسب Pavel Kodytek (10140509)

الموضوعات:

Workflow of the TITR algorithm. حسب Bradley Crone (19346873)

The workflow used to analyze imbalanced and balanced sequences. حسب Solomon Shiferaw Beyene (9143178)

The workflow of the proposed MSCA algorithm. حسب Muhammad Zubair Rehman (11243478)

Listed python codes of our algorithm with explanations (Python 3.9 recommended). حسب Takayuki Niizato (162226)

libEnsemble: New capabilities for coordinating dynamic ensembles of calculations حسب John-Luke Navarro (9024008)

Workflow of the BOMS algorithm. حسب Ocima Kamboj (21533199)

Python-based Monte Carlo Simulation Tool حسب Yangfan Jiang (9372782)

Workflow of the mycelium characterization algorithm. حسب Guillermo Vidal-Diez de Ulzurrun (7609925)

Python-Based Algorithm for Estimating NRTL Model Parameters with UNIFAC Model Simulation Results حسب Se-Hee Jo (20554623)

"…This algorithm conducts a series of procedures: (1) fragmentation of the molecules into functional groups from SMILES, (2) calculation of activity coefficients under predetermined temperature and mole fraction conditions by employing universal quasi-chemical functional group activity coefficient (UNIFAC) model, and (3) regression of NRTL model parameters by employing UNIFAC model simulation results in the differential evolution algorithm (DEA) and Nelder–Mead method (NMM). …"

The workflow of this study. حسب Yong Zhou (23772)

"…A total of 24 aging-related genes were identified, which were found to be mainly involved in the FoxO signaling pathway, PI3K-Akt signaling pathway, longevity regulating pathway, and peroxisome according to functional enrichment analysis. LASSO, SVM-RFE, and MCC algorithms identified three genes (<i>HSPA9</i>, <i>SOD2</i>, <i>TXN</i>). …"

<b>Opti2Phase</b>: Python scripts for two-stage focal reducer حسب Morgan Najera (21540776)

"…</li></ul><p dir="ltr">The scripts rely on the following Python packages. Where available, repository links are provided:</p><ol><li><b>NumPy</b>, version 1.22.1</li><li><b>SciPy</b>, version 1.7.3</li><li><b>PyGAD</b>, version 3.0.1 — https://pygad.readthedocs.io/en/latest/#</li><li><b>bees-algorithm</b>, version 1.0.2 — https://pypi.org/project/bees-algorithm</li><li><b>KrakenOS</b>, version 1.0.0.19 — https://github.com/Garchupiter/Kraken-Optical-Simulator</li><li><b>matplotlib</b>, version 3.5.2</li></ol><p dir="ltr">All scripts are modular and organized to reflect the design stages described in the manuscript.…"

Step by step workflow for PRLF model training and data scoring. حسب John Prindle (10774286)

TITR Algorithm Overview. The workflow of the TITR algorithm is shown describing each step, the tools used, specific conditions, and the output. حسب Bradley Crone (19346873)

Schematic of radial image analysis workflow used to analyze the impact of formalin diffusion on functional IHC staining to FOXP3. حسب Daniel R. Bauer (11565103)

MFPSP workflow. حسب Chao Wang (146527)

Workflow of algorithm for whole brain flow simulation. حسب Erlend Hodneland (391541)

Workflow of the study. حسب Hailin Li (453832)