Multi-scale detection of hierarchical community architecture in structural and functional brain networks by Arian Ashourvan (6685232)

“…To address this limitation, we exercise a multi-scale extension of a common community detection technique, and we apply the tool to synthetic graphs and to graphs derived from human neuroimaging data, including structural and functional imaging data. Our multi-scale community detection algorithm links a graph to copies of itself across neighboring topological scales, thereby becoming sensitive to conserved community organization across levels of the hierarchy. …”

The Precision-Recall curve of both the models. by Aastha Vatsyayan (9981916)

“…</p><p>Results</p><p>Using an independent validation dataset of ACMG & AMP classified variants, as well as a patient set of functionally validated variants, we showed how both algorithms perform and can be used to classify large numbers of variants in clinical as well as research settings.…”

Comparison of the performance of both models against 13 other models on the independent test dataset. by Aastha Vatsyayan (9981916)

Similarity between the allegiance matrices of the multiplex SC-FC graph, the FC graph alone, and the SC graph alone, as a function of the topological scale for the group. by Arian Ashourvan (6685232)

It includes raw data extracted from graphical experimental data sets presented in [22,23] for both P2X receptors and used in the fitting process. by Alireza Poshtkohi (11632250)

Model hyperparameters used for the XGBoost model. by Aastha Vatsyayan (9981916)

“…</p><p>Results</p><p>Using an independent validation dataset of ACMG & AMP classified variants, as well as a patient set of functionally validated variants, we showed how both algorithms perform and can be used to classify large numbers of variants in clinical as well as research settings.…”

Primers used in site-directed mutagenesis. by Aastha Vatsyayan (9981916)

“…</p><p>Results</p><p>Using an independent validation dataset of ACMG & AMP classified variants, as well as a patient set of functionally validated variants, we showed how both algorithms perform and can be used to classify large numbers of variants in clinical as well as research settings.…”

Intracellular Ca²⁺ transients from simultaneous activation of both hP2X₄ and hP2X₇ receptors. by Alireza Poshtkohi (11632250)

Modeling citrus huanglongbing data using a zero-inflated negative binomial distribution by Eudmar Paiva de Almeida (12808933)

S4 Table - by Aastha Vatsyayan (9981916)

Rare variants in <i>SMYD1</i> and <i>BMP10</i> identified in family 346 are functionally damaging. by David M. Gordon (3259002)

Demonstration of the limitations of existing spatial analysis methods, namely nearest neighbor distance (NND), G-cross function and Morisita-Horn index. by Mai Chan Lau (3135303)

Effect of Mitophagy Score on Immunotherapy for Different Datasets. by Jie Chu (293795)

Raw data of Cell experiments. by Jie Chu (293795)

“…The characteristics of the immune microenvironment were assessed using the CIBERSORT R package. Additionally, both the ssGSEA algorithm and the CIBERSORT algorithm were utilized to evaluate changes and effects in immunological characteristics during gastric cancer pathogenesis.…”

GSEA analysis. by Jie Chu (293795)

“…The characteristics of the immune microenvironment were assessed using the CIBERSORT R package. Additionally, both the ssGSEA algorithm and the CIBERSORT algorithm were utilized to evaluate changes and effects in immunological characteristics during gastric cancer pathogenesis.…”

Baseline data table. by Jie Chu (293795)

“…The characteristics of the immune microenvironment were assessed using the CIBERSORT R package. Additionally, both the ssGSEA algorithm and the CIBERSORT algorithm were utilized to evaluate changes and effects in immunological characteristics during gastric cancer pathogenesis.…”

KEGG analysis. by Jie Chu (293795)

“…The characteristics of the immune microenvironment were assessed using the CIBERSORT R package. Additionally, both the ssGSEA algorithm and the CIBERSORT algorithm were utilized to evaluate changes and effects in immunological characteristics during gastric cancer pathogenesis.…”

Analysis process. by Jie Chu (293795)

“…The characteristics of the immune microenvironment were assessed using the CIBERSORT R package. Additionally, both the ssGSEA algorithm and the CIBERSORT algorithm were utilized to evaluate changes and effects in immunological characteristics during gastric cancer pathogenesis.…”

Flowchart depicting the optimal control framework. by Antoine Falisse (6061601)

“…The AD-Recorder approach combines operator overloading, when generating the expression graph, and source code transformation, when processing the expression graph to generate C-code for <i>F</i>, <i>F fwd</i>, and <i>F rev</i>. In both approaches, the code comprising <i>F</i>, <i>F fwd</i>, and <i>F rev</i> is compiled as a Dynamic-link Library (DLL), which is imported as an external function within the CasADi environment. …”

Fig 3 - by Alireza Poshtkohi (11632250)