MGVB: a New Proteomics Toolset for Fast and Efficient Data Analysis by Metodi V. Metodiev (6089009)

Subjects: “…probabilistic scoring function…”

MGVB: a New Proteomics Toolset for Fast and Efficient Data Analysis by Metodi V. Metodiev (6089009)

Subjects: “…probabilistic scoring function…”

WCST scores and protein expression levels. by Chen Chen (6544)

“…This study investigated the association between serum protein expression profiles and cognitive variability in a healthy Thai population using machine learning algorithms. …”

PATH⁺ explains tighter binding of carbonic anhydrase II by brinzolamide. by Yuxi Long (11024307)

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An overview of PATH⁺. by Yuxi Long (11024307)

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The 10 features captured by persistence fingerprint. by Yuxi Long (11024307)

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^aTwo HIV-1 protease mutants bound to inhibitor darunavir (G48V: PDB ID 3cyw [81] & L90M: PDB ID 2f81 [82]). by Yuxi Long (11024307)

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Scatter plots of PATH⁺ and our implementation of TNet-BP’s predictions on a held-out, test subset of PDBBind v2020 refined set for one run (90:10 train:test split ratio,... by Yuxi Long (11024307)

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PATH⁺ correctly predicted a weaker binding affinity for HIV-1 protease with the drug-resistant G48V mutation (right, experimental kcal/mol, PDB ID: 3cyw [81]) bound to d... by Yuxi Long (11024307)

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Performance of TNet-BP and PATH⁺ on the PDBBind v2020 refined set shows that PATH⁺ achieves similar performance with TNet-BP while having three orders fewer f... by Yuxi Long (11024307)

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Construction of internuclear persistence contours (IPCs). by Yuxi Long (11024307)

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Comparison of PATH⁺ with TNet-BP [43]. by Yuxi Long (11024307)

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Workflow of the BOMS algorithm. by Ocima Kamboj (21533199)

Heat map of the top 9 protein variables. by Chen Chen (6544)

“…This study investigated the association between serum protein expression profiles and cognitive variability in a healthy Thai population using machine learning algorithms. …”

Quantum Computing and peptide folding by Akshay Uttarkar (19699990)

“…<p dir="ltr">The work "Peptide Folding with Quantum CVaR-VQE Algorithm" represents a significant advancement in the field of computational biology, particularly in the challenging domain of protein folding. …”

Strong negative correlation between the precision of algorithms and the evolutionary distance from the training data. by Sven B. Gould (12237287)

Identification and functional analysis of hub genes. by Wei Ya Lan (22403712)

“…<p>(A) Protein–protein interaction (PPI) network constructed using the STRING database with a confidence score > 0.04. …”

The “Bubblepole” (BUPO) Method for Linear-Scaling Coulomb Matrix Construction with or without Density Fitting by Frank Neese (736441)

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ClaritySpectra: Raman spectra analysis tool by Aaron Celestian (9395696)

<b>Algorithm Pseudocode</b> by Yibin Zhao (22425801)