Data from: Structural and Functional Analysis of Multi-interface Domains حسب ZHAO Liang (8657694)

"…This work applies graph theory and algorithms to discover fingerprints for the multiple interfaces of a domain and to establish associations between the interfaces and functions, based on a huge set of multi-interface proteins from PDB. …"

Table2_Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features.XLSX حسب Lei Chen (54296)

"…In this study, the protein–protein interaction network, functional annotation of proteins and a group of direct proteins with known subcellular localization were used to construct models. …"

Table3_Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features.XLSX حسب Lei Chen (54296)

"…In this study, the protein–protein interaction network, functional annotation of proteins and a group of direct proteins with known subcellular localization were used to construct models. …"

Table4_Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features.XLSX حسب Lei Chen (54296)

"…In this study, the protein–protein interaction network, functional annotation of proteins and a group of direct proteins with known subcellular localization were used to construct models. …"

Table1_Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features.XLSX حسب Lei Chen (54296)

"…In this study, the protein–protein interaction network, functional annotation of proteins and a group of direct proteins with known subcellular localization were used to construct models. …"

Schematics for gmxapi operations. حسب M. Eric Irrgang (4487278)

The workflow used to analyze imbalanced and balanced sequences. حسب Solomon Shiferaw Beyene (9143178)

Identification of hub genes from the PPI network by bottleneck algorithm using the cytoHubba Cytoscape plugin. حسب Cihat Erdogan (12529243)

PyNoetic’s classification module supports a range of popular and widely used ML classification models with just a single line of function call. حسب Gursimran Singh (575288)

الموضوعات:

Test to find best k-tuple algorithm settings. حسب Elzbieta Rembeza (5114207)

Root mean square fluctuation (RMSF) of the backbone atoms of the protein as a function of each amino acid residue. حسب L. F. S. Bonet (11502082)

CoV-human subnetwork including all the 10 “positive” annotated or predicted proteins for the GO term considered in our study (GO:0044650). حسب Paolo Perlasca (9909695)

الموضوعات:

2025-01-14 - PAG Talk - Kmerseek - Olga Botvinnik - Seanome حسب Olga Botvinnik (20571431)

الموضوعات:

Algorithm used for important sampling of the likelihood function. حسب Zhiyong Huang (3620000)

PATH (with persistence fingerprint) runs significantly faster than TNet-BP, a representative binding affinity prediction algorithm that uses persistent homology, on larger protein-... حسب Yuxi Long (11024307)

الموضوعات:

NRPStransformer, an Accurate Adenylation Domain Specificity Prediction Algorithm for Genome Mining of Nonribosomal Peptides حسب Zhihan Zhang (1403308)

"…Leveraging the sequences within the flavodoxin-like subdomain, we developed a substrate specificity prediction algorithm using a protein language model, achieving 92% overall prediction accuracy for 43 frequently observed amino acids, significantly improving the prediction reliability. …"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"