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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
algorithm a » algorithm _ (Expand Search), algorithm b (Expand Search), algorithms _ (Expand Search)
algorithm 1 » algorithm _ (Expand Search), algorithms _ (Expand Search), algorithm 8217 (Expand Search)
1 function » _ function (Expand Search), a function (Expand Search)
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The eVIP algorithm uses RNA-seq data to predict the function of somatic mutations.
Published 2021“…Impactful mutations are then tested for their directional impact of gain-of-function (GOF) or loss-of-function (LOF). For non-impactful mutations, a “power test” determines whether the two signatures are similar to one another due to a real signal or due to noise. …”
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Comparison of scores obtained by our interpenetration and scoring algorithm (ISA) and ROSETTA for a subset of structures.
Published 2023“…However, our algorithm was 1000 times faster than pyROSETTA (both algorithms have been parallelized on a per-structure basis using the Python package joblib [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1010531#pcbi.1010531.ref069" target="_blank">69</a>]).…”
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Data_Sheet_1_Algorithmic Annotation of Functional Roles for Components of 3,044 Human Molecular Pathways.zip
Published 2021“…We proposed an algorithm that identifies functional roles of the pathway components and applied it to annotate 3,044 human molecular pathways extracted from the Biocarta, Reactome, KEGG, Qiagen Pathway Central, NCI, and HumanCYC databases and including 9,022 gene products. …”
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2lpiRNApred: a two-layered integrated algorithm for identifying piRNAs and their functions based on LFE-GM feature selection
Published 2020“…A new feature selection algorithm, which was based on Luca fuzzy entropy and Gaussian membership function (LFE-GM), was proposed to reduce the dimensionality of the features. …”