Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics by Paolo Cifani (1575613)

“…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …”

Globus Compute: Fire-and-Forget Federated Function-as-a-Service by Kyle Chard (5131859)

Pseudocode of the RPath algorithm. by Daniel Domingo-Fernández (5432273)

“…., <i>lmax)</i>, the core function of the algorithm, <i>is_drug_prioritized</i>, returns whether a drug should be prioritized or not. …”

Automatic cropping algorithm. by Thomas W Georgi (12427189)

Design and implementation of DelaySSA. The input data for DelaySSA are reaction information, initial states, parameters and delays. Combining these into the simulation function, th... by Ziyan Jin (21021976)

Spatial patterns of the CAPs estimated from both splits are reproducible and strongly correlated with at least one of the basis CAPs. by Kangjoo Lee (11648345)

Comparison curve of objective function (J). by Wanjun Zhang (496858)

Data_Sheet_1_Resting-State Functional Connectivity Estimated With Hierarchical Bayesian Diffuse Optical Tomography.docx by Takatsugu Aihara (4433524)

“…Compared with the currently prevailing algorithms, our HB algorithm showed better performances in both the similarity to fMRI data and inter-run reproducibility, in terms of estimating the RSFC.…”

Modeling with uniform <i>σ</i> values. by Giacomo Janson (8138517)

Effect of <i>|Δd</i>_<i>n</i><i>|</i> perturbation on 3D modeling. by Giacomo Janson (8138517)

Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling by Giacomo Janson (8138517)

“…This program implements the “modeling by satisfaction of spatial restraints” strategy and its core algorithm has not been altered significantly since the early 1990s. …”

Example of use of the slightly off-axis strategies. by Raul Castañeda (13932971)

Example of the fully-compensated phase reconstruction package for off-axis DHM holograms recorded in telecentric configuration. by Raul Castañeda (13932971)

Flow chart diagram of quantum hash function. by Sultan H. Almotiri (14029251)

“…Our study addresses five major components of the quantum method to overcome these challenges: lattice-based cryptography, fully homomorphic algorithms, quantum key distribution, quantum hash functions, and blind quantum algorithms. …”

Comparison of edge detector and CHT in detecting droplets. by Manibarathi Vaithiyanathan (6655274)

Dynamical comparison between Drosha and Dicer reveals functional motion similarities and dissimilarities by Rotem Aharoni (8108177)

“…The overall structural and catalytic reaction similarity of both proteins, on the one hand, and differences in the substrate and its binding mechanisms, on the other, suggest that both proteins also share dynamic similarities and dissimilarities. …”

Similarity between the allegiance matrices of the multiplex SC-FC graph, the FC graph alone, and the SC graph alone, as a function of the topological scale for the group. by Arian Ashourvan (6685232)

Trainable parameters for different algorithms. by Anwar Hossain Efat (19942283)

Machine learning algorithm parameters. by Namal Rathnayake (15361124)

“…Results of the study showcased that both systems can simulate river flows as a function of catchment rainfalls; however, the Cat gradient Boosting algorithm (CatBoost) has a computational edge over the Adaptive Network Based Fuzzy Inference System (ANFIS). …”

General idea of alternative structures of aptamers binding the same ligand and its specific implementation scheme for the BioRS function. by Alexander V. Spirov (11302085)