Published 2025
“…Black solid line and gray shaded area represents the median and 95% credible intervals of incidence-based Rt, orange bars show daily number of detected cases, and shaded areas with different colors indicate different epidemic periods (increasing epidemic as blue-shaded period 1, epidemic peak as red-shaded period 2, and
decreasing epidemic as purple-shaded period 3). (B)
estimation accuracies of Ct-based Rt over testing periods for pathogen 1-4 corresponding to examples shown in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1013527#pcbi.1013527.g001" target="_blank">Fig 1C</a>. …”