Construction of a comprehensive organ surface dataset in Blender. by Takashi Kimura (178058)

Generation of MPR images in JPEG format from DICOM data. by Takashi Kimura (178058)

List of Abbreviations by Gursimran Singh (575288)

“…However, existing BCI frameworks face several limitations, including a lack of stage-wise flexibility essential for experimental research, steep learning curves for researchers without programming expertise, elevated costs due to reliance on proprietary software, and a lack of all-inclusive features leading to the use of multiple external tools affecting research outcomes. …”

Real-Time Optical Imaging Acquisition and Processing in Python: A Practical Guide Using CAS: Code Repository by Michael Hughes (8821646)

“…<p dir="ltr">Real-time data acquisition and processing is an important step in the development of new approaches to optical imaging in the research lab. Python is increasingly used for scientific computing, and allows for straightforward application of artificial intelligence models using popular frameworks such as PyTorch. …”

Artifact for the ATVA 2025 paper "PolyQEnt: A Polynomial Quantified Entailment Solver" by Krishnendu Chatterjee (15367413)

Raw datasets acquired to investigate the possible roles of CAHS proteins from tardigrade in osmotic stress tolerance in mammalian cells and their analysis program by Takahiro Bino (8898745)

“…</p> <p><br></p> <p>In order to utilize the Python program code, it is necessary to refer to the file whose name corresponds to the respective filename.…”

HCC Evaluation Dataset and Results by Jens-Rene Giesen (18461928)

Not All local LLMs Are Equal: A Benchmark of Energy and Performance by Simão Cunha (19712455)

“…However, installing these specific versions is not mandatory:<br><br>```bash<br>bash scripts/install_prerequisites.sh<br>```<br><br>#### Dependencies<br><br>1. Install all Python libraries listed in `requirements.txt` using a virtual environment (e.g., named `env`):<br><br>```bash<br># Create a virtual environment named 'env'<br>python3 -m venv env<br><br># Activate the virtual environment<br>source env/bin/activate<br><br># Install the required Python libraries<br>pip3 install -r requirements.txt<br>```<br><br>For `llama-cpp-python` installation with CPU support (used in this paper), execute:<br><br>```bash<br>CMAKE_ARGS="-DLLAMA_BLAS=ON -DLLAMA_BLAS_VENDOR=OpenBLAS" pip3 install llama-cpp-python<br>```<br><br>For other hardware acceleration backends, refer to the [llama-cpp-python documentation](<u>https://github.com/abetlen/llama-cpp-python?…”

Skyeye: Detecting Imminent Attacks via Analyzing Adversarial Smart Contracts by Hao Wu (18777114)

The artifacts and data for the paper "DD4AV: Detecting Atomicity Violations in Interrupt-Driven Programs with Guided Concolic Execution and Filtering" (OOPSLA 2025) by zixuan yuan (17602152)

“…</p><h3><b>Steps:</b></h3><h4><b>1) Navigate to the working directory:</b><br><code>cd $ROOT_DIR/test/simple_test</code></h4><p><br></p><p dir="ltr"><b>2) Build the program using the provided scripts:</b><br><code>.…”

Regions of the LV and septum perform negative work in LBBB and CRT for responders and non-responders. by Amanda Craine (19832365)

Poster: Evaluating outcomes of embedding coding activities in an advanced (astro)physics module by Judith Croston (20780552)

“…The activities aim to make abstract ideas concrete, provide authentic experiences of advanced physics and astronomy tasks, and to further develop valuable employability skills in coding and Python.</p><p dir="ltr">This project will explore student experience with the S385 activities and will examine the relationship between Python engagement, use of supporting resources, performance on Python assessment tasks, and overall module performance, so as to assess whether the aims of the embedded Python activities have been achieved.…”

Replication package for Automated Extract Method Refactoring with Open-Source LLMs by Sivajeet Chand (21786839)

“…The framework allows you to test and evaluate multiple models on real-world Python code samples.</p><p dir="ltr"><br></p><p>---</p>Features<p dir="ltr">- Supports 5 popular LLMs for code refactoring</p><p dir="ltr">- Works on sample Python files in batch</p><p dir="ltr">- Flexible model configuration via `model.yaml`</p><p dir="ltr">- Designed for experimentation and evaluation in research or production</p><p dir="ltr">- Uses CodeNet dataset</p><p><br></p><p><br></p><p dir="ltr">Specify one of the following in `CodeBase/model.yaml`:</p><p><br></p><p dir="ltr">- `Qwen/CodeQwen1.5-7B-Chat`</p><p dir="ltr">- `deepseek-ai/deepseek-coder-6.7b-instruct`</p><p dir="ltr">- `meta-llama/Llama-3.2-3B-Instruct`</p><p dir="ltr">- `Qwen/Qwen2.5-Coder-7B-Instruct`</p><p dir="ltr">- `microsoft/Phi-4-mini-instruct`</p><p><br></p><p dir="ltr">Specify one of the following in `CodeBase/prompts.yaml`:</p><p><br></p><p dir="ltr">- `few_shot`</p><p dir="ltr">- `zero_shot`</p><p dir="ltr">- `rci`</p><p><br></p><p dir="ltr">Dependencies:</p><p><br></p><p dir="ltr">- pip install -r requirements.txt</p><p><br></p><p dir="ltr">Data:</p><p><br></p><p dir="ltr">- data/Python_wrapped </p><p dir="ltr">- data/Problem_descriptions </p><p dir="ltr">- selected_files.txt</p><p><br></p><p dir="ltr">Run :</p><p><br></p><p dir="ltr">- inference.main</p>…”

Genosophus: A Dynamical-Systems Diagnostic Engine for Neural Representation Analysis by Alan Glanz (22109698)

High-Throughput Mass Spectral Library Searching of Small Molecules in R with NIST MSPepSearch by Andrey Samokhin (20282728)

“…High-level programming languages such as Python and R are widely used in mass spectrometry data processing, where library searching is a standard step. …”

Landlab: a new, open-source, modular, Python-based tool for modelling Earth surface dynamics by Daniel E. J. Hobley (19689817)

Nomogram for optimization analyses following the Boltzmann distribution. by Trevor Blight (20685529)

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Nomogram for determining the average interest for a range of years going from 1 to 20. by Trevor Blight (20685529)

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Nomogram obtained from the example. by Trevor Blight (20685529)

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Screenshot showing the basic starting Nomogen’s code structure. by Trevor Blight (20685529)

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