SEPARATE Code Repository by Gyuri Kim (21424973)

“…<p dir="ltr">Python implementation of the SEPARATE, which enables three-dimensional multiplexed fluorescence imaging by pairing proteins based on their spatial expression patterns and computationally unmixing signals using deep learning.…”

Exercises of the AAU-DA Summer School 2025 by Leire Retegui-Schiettekatte (18008506)

Data&Codes.zip by Zer0 Star (20545655)

“…</p><p dir="ltr">To facilitate the widespread use of the proposed framework, we have implemented it as the <b><i>ESLocalIndi</i></b> open-source package in Python, making it easily accessible to geographers. …”

software code of NeoDesign by Wenqian Yu (19730101)

“…<h2>Implementation and Dependencies</h2><p dir="ltr">neoDesign was developed with python (recommend>3.9) and shell (bash) language. …”

DA-Faster-RCNN code by Seunghyeon Wang (16500132)

“…The implementation is written in Python using PyTorch and Detectron2.…”

Reproducible Code and Data for figures by Bonyad Ahmadi (20750327)

“…</i></p><p dir="ltr">It contains:</p><p dir="ltr">✅ <b>Python Code</b> – Scripts used for data preprocessing, and visualization.…”

Simulation Code and Raw Data by Melih Özkurt (22278520)

“…<p dir="ltr">Reproducible code (Python) implementing a symmetrized split-step Fourier method (SSFM), with configuration files for all scans. …”

DeepB3Pred - code by Saleh Musleh (22263718)

“…MCTD is the implementation of composition-transition and distribution, and GSFE is the implementation of graphical and statistical-based feature engineering.…”

RealBench: A Repo-Level Code Generation Benchmark Aligned with Real-World Software Development Practices by RealBench RealBench (22275393)

“…<br>│ ├── model_gen/ # Code generation using various LLMs.<br>│ │ ├── generate/ # LLM inference implementations.…”

Five Operator Lattice Simulation by James McDaniel (22522571)

“…<p dir="ltr">This dataset contains the Python simulation code and supporting documentation for the paper <i>A Five-Operator Lattice of Consciousness: A Logical Framework for Mediation Between Implicit and Explicit Processing</i> (McDaniel, 2025).…”

A game of life with dormancy - Code by Daniel Henrik Nevermann (20376933)

“…</p><ul><li>To run an animated simulation, use `python simulation.py'.</li><li>The implementation of Spore Life can be found in gol.py.…”

DeepB3Pred_source_code by Muhammad Arif (17012472)

“…Testing dataset TS_BB includes BBB_pos and BBB_neg testing samples</p><p dir="ltr">**Feature_Extraction: CPSR is the implementation of component protein sequence representation. mctd is the implementation of composition-transition and distribution, GSFE is the implementation of Graphical and statistical-based feature engineering.…”

This package of Python scripts implements the proposed unsupervised sentiment analysis approach. It contains a pre-processing script (preprocess.py), a script that calculates BERT... by Xiaohan Yu (7525940)

Simple implementation examples of agent AI on free energy calculation and phase-field simulation by Toshiyuki Koyama (22828581)

“…</p> <p>Using Gibbs energy calculations and diffusion simulations as examples, we demonstrated the implementation method and usefulness of simple agent AI, where sample python codes are distributed as supplemental materials.…”

Data and code for: Automatic fish scale analysis by Christian Vogelmann (21646472)

“…<p dir="ltr">This dataset accompanies the publication:<br><b>"Automatic fish scale analysis: age determination, annuli and circuli detection, length and weight back-calculation of coregonid scales"</b><br></p><p dir="ltr">It provides all essential data and statistical outputs used for the <b>verification and validation</b> of the <i>Coregon Analyzer</i> – a Python-based algorithm for automated biometric fish scale measurement.…”

Testing Code for JcvPCA and JsvCRP. by Océane Dubois (21989812)

“…<p>This file contains the code that implements both metrics in python and apply them on a simulated dataset.…”

World map demonstrating the countries that have implemented some level of liberal drug policies versus countries that had publications included in this scoping review. by Mana Mohebbian (22439269)

EthoPy: Reproducible Behavioral Neuroscience Made Simple by Alexandros Evangelou (22235917)

“…To overcome these challenges, we developed EthoPy, an open-source, Python-based behavioral control framework that integrates stimulus presentation, hardware management, and data logging. …”

Complex Eigenvalues, Orthogonality, and QR Factorization: Analytical Proofs and Numerical Verification by Umar Tabbsum (22058780)

“…Discrepancies between QR-based solutions and NumPy’s lstsq method are quantified to confirm high accuracy (~10⁻¹⁶), demonstrating numerical stability and machine-precision correctness.…”

PTPC-UHT bounce by David Parry (22169299)

“…<br>It contains the full Python implementation of the PTPC bounce model (<code>PTPC_UHT_bounce.py</code>) and representative outputs used to generate the figures in the paper. …”