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code presented » model presented (Expand Search), side presented (Expand Search), order presented (Expand Search)
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Poster: PyGMT: Accessing the Generic Mapping Tools from Python
Published 2019“…Since version 5, GMT has provided a C language Application Programming Interface (API) that allows other programs to access its core functionality. We are using this bridge to develop PyGMT (<a href="http://www.pygmt.org/" rel="nofollow">www.pygmt.org</a>; formerly GMT/Python), an open-source library that allows users of the Python programming language to leverage the almost thirty years of continuous GMT development. …”
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Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements
Published 2021“…<div>This directory contains Python 3 scripts implementing the Trajectory Adaptive Multilevel Sampling algorithm (TAMS), a variant of Adaptive Multilevel Splitting (AMS), for the study of rare events. …”
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WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation Data
Published 2024“…Here, we present the WEDAP Python package for simplifying the analysis of data generated from either conventional MD simulations or the weighted ensemble (WE) path sampling method, as implemented in the widely used WESTPA software package. …”
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Fluent Python nuggets. A brief presentation.
Published 2020“…Some nuggets of Python coding wisdom out of the book Fluent Python by Lucian Ramalho. …”
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Data_Sheet_1_An Open-Source Tool for Anisotropic Radiation Therapy Planning in Neuro-oncology Using DW-MRI Tractography.pdf
Published 2019“…We present an open-source WMPL tool, implemented in the package Diffusion Imaging in Python (DIPY), and code to convert the resulting WMPL map to anisotropic contours for RT in a commercial treatment planning system. …”
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FeO<sub>s</sub>: An Open-Source Framework for Equations of State and Classical Density Functional Theory
Published 2023“…Equations of state can be implemented in Rust, yielding performant code, or as a Python class, which is useful for prototyping and with less emphasis on execution speed. …”
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