Accompanying data files (Melbourne, Washington DC, Singapore, and NYC-Manhattan) حسب Winston Yap (13771969)

"…<p dir="ltr">Supporting files to implement GNN training for Melbourne, Singapore, Washington DC, and NYC-Manhattan. …"

Extending the pyAFQ software. حسب John Kruper (18809386)

Workflow of a typical Epydemix run. حسب Nicolò Gozzi (8837522)

"…<div><p>We present Epydemix, an open-source Python package for the development and calibration of stochastic compartmental epidemic models. …"

Workflow of segmentation model creation and application. حسب Vincent Hickl (16947429)

Single Cell DNA methylation data for Human Brain altas MajorType allc files (CG+CH) حسب Wubin Ding (11823941)

"…</p><p dir="ltr">PMID: 37824674</p><p dir="ltr"><br></p><p dir="ltr">How to download</p><p dir="ltr">To quickly download the whole folder, Python package pyfigshare can be implemented. please refer to pyfigshare documentation: https://github.com/DingWB/pyfigshare</p><p dir="ltr">for example: figshare download 28424780 -o downlnoaded_data</p>…"

Single Cell DNA methylation data for Human Brain altas (MajorType+Region CG allc files) حسب Wubin Ding (11823941)

"…</p><p dir="ltr">PMID: 37824674</p><p><br></p><h2>How to download</h2><p dir="ltr">To quickly download the whole folder, Python package <a href="https://github.com/DingWB/pyfigshare" rel="noreferrer" target="_blank">pyfigshare</a> can be implemented. please refer to pyfigshare documentation: <a href="https://github.com/DingWB/pyfigshare" rel="noreferrer" target="_blank">https://github.com/DingWB/pyfigshare</a></p><p dir="ltr">for example: <code>figshare download 28424780 -o downlnoaded_data</code></p>…"

BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories حسب Elizaveta Mukhaleva (20602550)

"…Concurrently, our ability to perform long-time scale molecular dynamics (MD) simulations on proteins and other materials has increased exponentially. …"

BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories حسب Elizaveta Mukhaleva (20602550)

"…Concurrently, our ability to perform long-time scale molecular dynamics (MD) simulations on proteins and other materials has increased exponentially. …"

BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories حسب Elizaveta Mukhaleva (20602550)

"…Concurrently, our ability to perform long-time scale molecular dynamics (MD) simulations on proteins and other materials has increased exponentially. …"

Deep Learning-Based Visual Enhancement and Real-Time Underground-Mine Water Inflow Detection حسب Huichao Yin (14589020)

"…<p dir="ltr">Python image preprocessing and model implementation for research of "Deep Learning-Based Visual Enhancement and Real-Time Underground-Mine Water Inflow Detection".…"

Data Sheet 1_COCαDA - a fast and scalable algorithm for interatomic contact detection in proteins using Cα distance matrices.pdf حسب Rafael Pereira Lemos (9104911)

"…Here, we introduce COCαDA (COntact search pruning by Cα Distance Analysis), a Python-based command-line tool for improving search pruning in large-scale interatomic protein contact analysis using alpha-carbon (Cα) distance matrices. …"

Neural-Signal Tokenization and Real-Time Contextual Foundation Modelling for Sovereign-Scale AGI Systems حسب Lakshit Mathur (20894549)

"…The work advances national AI autonomy, real-time cognitive context modeling, and ethical human-AI integration.…"

Map of cumulative daily root-mean-square errors for each province in China in the test set. حسب Xiaoyi Wang (90589)

A Structured Attempt at a Polynomial-Time Solution to the Subset Sum Problem and Its Implications for P vs NP حسب MInakshi Aggarwal (21677633)

"…The manuscript includes theoretical formulation, Python implementation, verified output snapshots, and detailed analysis — aimed at opening fresh discourse on the P vs NP question. …"

High-Throughput Mass Spectral Library Searching of Small Molecules in R with NIST MSPepSearch حسب Andrey Samokhin (20282728)

"…High-level programming languages such as Python and R are widely used in mass spectrometry data processing, where library searching is a standard step. …"

The format of the simulation reports حسب Joseph James Tharayil (21416715)

"…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …"

HCC Evaluation Dataset and Results حسب Jens-Rene Giesen (18461928)

"…</p><h3>Report Script</h3><p dir="ltr">On the top-level directory you find a <code>report.py</code> file, which is an executable Python script. The only requirement for running this script is a Python 3.6+ interpreter as well as an installation of the <code>numpy</code> package. …"

Genosophus: A Dynamical-Systems Diagnostic Engine for Neural Representation Analysis حسب Alan Glanz (22109698)

"…</p><h2><b>Included Files</b></h2><h3><b>1. </b><code><strong>GenosophusV2.py</strong></code></h3><p dir="ltr">Executable Python implementation of the Genosophus Engine.…"

Performance Benchmark: SBMLNetwork vs. SBMLDiagrams Auto-layout. حسب Adel Heydarabadipour (22290905)

"…<p>Log–log plot of median wall-clock time for SBMLNetwork’s C++-based auto-layout engine (blue circles, solid fit) and SBMLDiagrams’ implementation of the pure-Python NetworkX spring_layout algorithm (red squares, dashed fit), applied to synthetic SBML models containing 20–2,000 species, with a fixed 4:1 species-to-reaction ratio. …"

Genomic Surveillance of Pemivibart (VYD2311) Escape-Associated Mutations in SARS-CoV-2: December 2025 BioSamples (n=2) حسب Tahir Bhatti (20961974)

"…The pipeline integrates established open-source tools (fastp, BWA-MEM, samtools, iVar, bcftools) and implements <b>codon-aware mutation calling</b> at five canonical RBD positions (R346, S371, K444, F456, F486) relative to NC_045512.2. …"