DeepGS_python.py by Pallavi Sinha (15952017)

Modelling COVID-19 evolution and control in Portugal: Code and data from 2 of March to 19 August 2020. by Ricardo Jorge Pais (3627494)

“…In this online repository we include the code for implementing the mathematical model and running the simulations using PLAS software. …”

Secondary structures for two ncRNAs, predicted with <i>mfold</i>. by Atara Neugroschl (16884406)

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Successful image data extraction in a python environment. by Alireza Naghizadeh (11016333)

ClaritySpectra: Raman spectra analysis tool by Aaron Celestian (9395696)

python3 software to reproduce Figs 6, 7 and 8. by Stéphane Plaszczynski (14992817)

Data_Sheet_1_An Open-Source Tool for Anisotropic Radiation Therapy Planning in Neuro-oncology Using DW-MRI Tractography.pdf by Kesshi Jordan (7329089)

“…We present an open-source WMPL tool, implemented in the package Diffusion Imaging in Python (DIPY), and code to convert the resulting WMPL map to anisotropic contours for RT in a commercial treatment planning system. …”

FWC python implementation by Roland Mühlenbernd (11755871)

Implementation of the SAACS in python. by Pavel Škrabánek (6106427)

NLoed: A Python Package for Nonlinear Optimal Experimental Design in Systems Biology by Nathan Braniff (14149834)

“…Moreover, existing OED tools do not make use of the state-of-the-art numerical tools, resulting in inefficient computation. …”

Python code for estimating parameters of an ALAAM model. by Alex Stivala (8356257)

The optimal ProSmith models combine predictions based on the multimodal Transformer Network with predictions based on separate numerical representations of proteins and small molec... by Alexander Kroll (9304225)

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Model for the maximal effective bandwidth of numerical models (lines = model prediction by Eq 12; symbols = measured maximal effective bandwidth; filled = f64; hollow = f32; black... by Xuzhen He (14676114)

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Performance metrics for ProSmith and ESP for the prediction of enzyme-substrate pairs. by Alexander Kroll (9304225)

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Model for the effective bandwidth of element-wise operations (lines = model prediction by Eq 11; symbols = measured maximal effective bandwidth; filled symbols = matrix operations;... by Xuzhen He (14676114)

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For accurate DTA predictions, ProSmith requires training on identical drugs but not on similar proteins. by Alexander Kroll (9304225)

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Enzyme-substrate pair predictions improve with increasing substrate similarity compared to training substrates. by Alexander Kroll (9304225)

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Coefficient of determination <i>R</i>² of ProSmith for different splitting scenarios of the Davis dataset. by Alexander Kroll (9304225)

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Shoreline Prediction ArcPy Tool by Stephen Escarzaga (7879877)

“…The included tool was written in Python with ArcPy commands that allow it to use the ArcGIS infrastructure. …”

Performance metrics for ProSmith and previously published methods for DTA prediction for different splitting scenarios. by Alexander Kroll (9304225)

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