Primary Respiratory Chain Disease Causes Tissue-Specific Dysregulation of the Global Transcriptome and Nutrient-Sensing Signaling Network by Zhe Zhang (81603)

“…Global transcriptional and post-transcriptional dysregulation was also found to occur in a highly tissue-specific fashion. In particular, RC disease muscle had decreased transcription of cytosolic ribosomal proteins suggestive of reduced anabolic processes, increased transcription of mitochondrial ribosomal proteins, shorter 5′-UTRs that likely improve translational efficiency, and stabilization of 3′-UTRs containing AU-rich elements. …”

DataSheet1_Genetic diversity and population structure of Tongcheng pigs in China using whole-genome SNP chip.docx by Jiao Yuan (6393758)

“…The multi-dimensional scaling (MDS) analysis and neighbor-joining tree revealed that all 68 pigs were from a purebred population. The effective population size decreased over time, and it was 96 prior to generation 20. …”

Data_Sheet_1_Duchenne Muscular Dystrophy With Low Acidic α-Glucosidase Activity: Two Case Reports and Literature Review.ZIP by Xiufang He (12704855)

“…</p>Case Presentation<p>Case 1 patient was a 2-month-old boy who presented with an extremely high serum CK level (5,480∼11,880 U/L) and low GAA activity (2.72 nmol/1 h/mg). …”

Data_Sheet_1_New model of superior semicircular canal dehiscence with reversible diagnostic findings characteristic of patients with the disorder.pdf by P. Ashley Wackym (8123117)

“…There are two essential objective diagnostic characteristics needed to validate a model of SSCD: the creation of a pseudoconductive hearing loss and cVEMP increased amplitude and decreased threshold.…”

Advantages of generalists (producers of both endo and exo-enzymes). by Ksenia Guseva (8711190)

“…The parameters are the same as the ones used in simulation in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012320#pcbi.1012320.g005" target="_blank">Fig 5</a>, except for the turnover of endo-enzymes, which is <i>k</i>_<i>endo</i> = <i>k</i>_<i>exo</i>/2. …”

DataSheet1_Characterization of sclerostin’s response within white adipose tissue to an obesogenic diet at rest and in response to acute exercise in male mice.PDF by Nigel Kurgan (6533759)

“…</p><p>Methods: Male C57BL/6 mice (n = 40, 18 weeks of age) underwent 10 weeks of either a low-fat diet (LFD) or HFD. Within each diet group, mice were assigned to either remain sedentary (SED) or perform 2 h of endurance treadmill exercise at 15 m min⁻¹ with 5° incline (EX), creating four groups: LFD + SED (N = 10), LFD + EX (N = 10), HFD + SED (N = 10), and HFD + EX (N = 10). …”

Conceptual framework. by Karl Andraczek (16469731)

“…Pathways are sequentially numbered referring to supporting evidence, 1: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref046" target="_blank">46</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref047" target="_blank">47</a>], 2: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref010" target="_blank">10</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref044" target="_blank">44</a>], 3 and 4: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref016" target="_blank">16</a>], 5: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref011" target="_blank">11</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref015" target="_blank">15</a>], 6: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref047" target="_blank">47</a>], 7: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref013" target="_blank">13</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref014" target="_blank">14</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref048" target="_blank">48</a>], 8: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref028" target="_blank">28</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref033" target="_blank">33</a>]. …”

Table 1_Biological characterization of novel Escherichia coli O157:H7 phages and their bacteriostatic effects in milk and pork.xlsx by Qinghai Ren (20686166)

“…Genomic comparisons suggest vB_EcoP_SD2 and vB_EcoP_SD6, respectively, constituted a novel member of a new genus, Justusliebigvirus genus and Kayfunavirus genus which genome, respectively, was found to be 1,49,066 bp, 40,202 bp long with an average GC content of 37.5 and 49.8%. …”

Data Sheet 1_Biological characterization of novel Escherichia coli O157:H7 phages and their bacteriostatic effects in milk and pork.pdf by Qinghai Ren (20686166)

“…Genomic comparisons suggest vB_EcoP_SD2 and vB_EcoP_SD6, respectively, constituted a novel member of a new genus, Justusliebigvirus genus and Kayfunavirus genus which genome, respectively, was found to be 1,49,066 bp, 40,202 bp long with an average GC content of 37.5 and 49.8%. …”

Table 2_Biological characterization of novel Escherichia coli O157:H7 phages and their bacteriostatic effects in milk and pork.xlsx by Qinghai Ren (20686166)

“…Genomic comparisons suggest vB_EcoP_SD2 and vB_EcoP_SD6, respectively, constituted a novel member of a new genus, Justusliebigvirus genus and Kayfunavirus genus which genome, respectively, was found to be 1,49,066 bp, 40,202 bp long with an average GC content of 37.5 and 49.8%. …”

Flow chart of exclusions. by Kimberly J. Johnson (4281190)

1(OH) Vitamin D3 Supplementation Improves the Sensitivity of the Immune-Response during Peg-IFN/RBV Therapy in Chronic Hepatitis C Patients-Case Controlled Trial by Yasuteru Kondo (209215)

“…The expression of Interferon-stimulated genes (ISGs)-mRNA in the liver biopsy samples and JFH-1 replicating Huh-7 cells were quantified by real-time PCR. …”

Multiple Candidate Effectors from the Oomycete Pathogen <em>Hyaloperonospora arabidopsidis</em> Suppress Host Plant Immunity by Georgina Fabro (198543)

Table1_Comparative study on the effects of crystalline L-methionine and methionine hydroxy analogue calcium supplementations in the diet of juvenile Pacific white shrimp (Litopenae... by Lu Zheng (132726)

“…White shrimp (initial body weight 0.23 ± 0.00 g, 50 shrimp per tank) were allocated to 12 tanks and divided among 4 treatments in triplicates. …”

Table1_Anti-inflammatory and protective effects of Pimpinella candolleana on ulcerative colitis in rats: a comprehensive study of quality, chemical composition, and molecular mecha... by Xiaoqi Liu (45630)

“…Pimpinella candolleana also modulated the levels of IL-2 and IL-6 in UC rats, reduced the expression of pro-inflammatory cytokines such as IL-6, MAPK8, TNF-α, CHUK, and IKBKB mRNA, and decreased the expression of TNF, IKBKB, JUN, and CHUK proteins in the colon of UC rats, thereby reducing inflammation and alleviating UC symptoms.…”

DataSheet_1_Lipopolysaccharide-responsive beige-like anchor is involved in regulating NF-κB activation in B cells.pdf by Daniela Pérez-Pérez (18861310)

DataSheet1_Energy-based break-even transportation distance of biomass feedstocks.pdf by J. S. Tumuluru (18288877)

“…Biomass feedstock bulk densities where transportation becomes mass-limited are 223, 1,480, and 656 kg/m³ for truck, rail, and ship, respectively. …”

Short and Long-Term Effects of the Angiotensin II Receptor Blocker Irbesartan on Intradialytic Central Hemodynamics: A Randomized Double-Blind Placebo-Controlled One-Year Intervent... by Christian Daugaard Peters (748219)

“…</p><p>Setting and Participants</p><p>Eighty-two hemodialysis patients with urine output >300 mL/day and dialysis vintage <1 year.</p><p>Intervention</p><p>Irbesartan/placebo 300 mg/day for 12 months administered as add-on to antihypertensive treatment using a predialytic systolic blood pressure target of 140 mmHg in all patients.…”

Schematic presentation of proteins and metabolites in the <i>IPMDH</i> mutants. by Yan He (116705)

“…<p>Proteins and metabolites in red indicate increased and in green decreased in the mutants compared to wild-type. AH, aconitate hydratase; ALPase, aleurain-like protease; APase, aminopeptidase; APX, ascorbate peroxidase; ArgJ, arginine biosynthesis protein ArgJ; AsA, ascorbate acid; ASDH, aspartate semialdehyde dehydrogenase; ATCase, aspartate transcarbamylase; BCAT, branched-chain aminotransferase; CAT, catalase; CHSP70, chloroplast heat shock protein 70; CRNP, chloroplast 29 kDa ribonucleoprotein; CRR, chlororespiratory reduction; CS, citrate synthase; CYP, luminal cyclophilin; DBP, DNA-binding protein; DHA, dehydroascorbate; DHAD, dihydroxyacid dehydratase; DHAR, dehydroascorbate reductase; FBA, fructose-bisphosphate aldolase; GABA, γ-aminobutyrate; GCSH, glycine cleavage system H protein; GGAT, glutamate:glyoxylate aminotransferase; GOX, glyoxalase; GRX, glutaredoxin; GS, glutamate synthase; GSH, glutathione; GSSG, oxidized glutathione; GST, glutathione S transferase; HSC, heat shock cognate; HSK, homoserine kinase; IDH, isocitrate dehydrogenase; IPMDH, 3-isopropylmalate dehydrogenase; KARI, ketol-acid reductoisomerase; LeuC, isopropylmalate isomerase large subunit; LeuD, isopropylmalate isomerase small subunit; MAM, methylthioalkylmalate synthase; MDH, malate dehydrogenase; MDHA, monohydroascorbate; MUR, GDP-D-mannose-4,6-dehydratase; MS, methionine synthase; OAS-TL, O-acetylserine (thiol) lyase; PGM, phosphoglucomutase; PHS, alpha-glucan phosphorylase; PIFI, post-illumination chlorophyll fluorescence increase; Prx, 2-cys peroxiredoxin; PSI, photosystem I; PSII, photosystem II; RBP, RNA binding protein; SOD, superoxide dismutase; ST5B, desulfoglucosinolate sulfotransferase; SUR, superroot; TCA, tricarboxylic acid; TF, transcription factor; TIL, temperature-induced lipocalin; TLP, thylakoid lumenal protein; Trx, thioredoxin; TSP, thylakoid soluble phosphoprotein.…”

Molecular Dynamics Simulations of Threadlike Cetyltrimethylammonium Chloride Micelles: Effects of Sodium Chloride and Sodium Salicylate Salts by Zuowei Wang (333190)

“…Long threadlike micelles are found to be unstable and break into spherical micelles at low concentrations of NaCl, but remain stable for 20 ns above a threshold value of [NaCl] ≈ 3.0 M, which is about 2.5 times larger than the experimental salt concentration at which the transition between spherical and rodlike micelles occurs. …”