Conceptual framework. by Karl Andraczek (16469731)

“…Pathways are sequentially numbered referring to supporting evidence, 1: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref046" target="_blank">46</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref047" target="_blank">47</a>], 2: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref010" target="_blank">10</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref044" target="_blank">44</a>], 3 and 4: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref016" target="_blank">16</a>], 5: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref011" target="_blank">11</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref015" target="_blank">15</a>], 6: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref047" target="_blank">47</a>], 7: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref013" target="_blank">13</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref014" target="_blank">14</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref048" target="_blank">48</a>], 8: [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref028" target="_blank">28</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0287039#pone.0287039.ref033" target="_blank">33</a>]. …”

Table 1_Biological characterization of novel Escherichia coli O157:H7 phages and their bacteriostatic effects in milk and pork.xlsx by Qinghai Ren (20686166)

“…Genomic comparisons suggest vB_EcoP_SD2 and vB_EcoP_SD6, respectively, constituted a novel member of a new genus, Justusliebigvirus genus and Kayfunavirus genus which genome, respectively, was found to be 1,49,066 bp, 40,202 bp long with an average GC content of 37.5 and 49.8%. …”

Data Sheet 1_Biological characterization of novel Escherichia coli O157:H7 phages and their bacteriostatic effects in milk and pork.pdf by Qinghai Ren (20686166)

“…Genomic comparisons suggest vB_EcoP_SD2 and vB_EcoP_SD6, respectively, constituted a novel member of a new genus, Justusliebigvirus genus and Kayfunavirus genus which genome, respectively, was found to be 1,49,066 bp, 40,202 bp long with an average GC content of 37.5 and 49.8%. …”

Table 2_Biological characterization of novel Escherichia coli O157:H7 phages and their bacteriostatic effects in milk and pork.xlsx by Qinghai Ren (20686166)

“…Genomic comparisons suggest vB_EcoP_SD2 and vB_EcoP_SD6, respectively, constituted a novel member of a new genus, Justusliebigvirus genus and Kayfunavirus genus which genome, respectively, was found to be 1,49,066 bp, 40,202 bp long with an average GC content of 37.5 and 49.8%. …”

Schematic presentation of proteins and metabolites in the <i>IPMDH</i> mutants. by Yan He (116705)

“…<p>Proteins and metabolites in red indicate increased and in green decreased in the mutants compared to wild-type. AH, aconitate hydratase; ALPase, aleurain-like protease; APase, aminopeptidase; APX, ascorbate peroxidase; ArgJ, arginine biosynthesis protein ArgJ; AsA, ascorbate acid; ASDH, aspartate semialdehyde dehydrogenase; ATCase, aspartate transcarbamylase; BCAT, branched-chain aminotransferase; CAT, catalase; CHSP70, chloroplast heat shock protein 70; CRNP, chloroplast 29 kDa ribonucleoprotein; CRR, chlororespiratory reduction; CS, citrate synthase; CYP, luminal cyclophilin; DBP, DNA-binding protein; DHA, dehydroascorbate; DHAD, dihydroxyacid dehydratase; DHAR, dehydroascorbate reductase; FBA, fructose-bisphosphate aldolase; GABA, γ-aminobutyrate; GCSH, glycine cleavage system H protein; GGAT, glutamate:glyoxylate aminotransferase; GOX, glyoxalase; GRX, glutaredoxin; GS, glutamate synthase; GSH, glutathione; GSSG, oxidized glutathione; GST, glutathione S transferase; HSC, heat shock cognate; HSK, homoserine kinase; IDH, isocitrate dehydrogenase; IPMDH, 3-isopropylmalate dehydrogenase; KARI, ketol-acid reductoisomerase; LeuC, isopropylmalate isomerase large subunit; LeuD, isopropylmalate isomerase small subunit; MAM, methylthioalkylmalate synthase; MDH, malate dehydrogenase; MDHA, monohydroascorbate; MUR, GDP-D-mannose-4,6-dehydratase; MS, methionine synthase; OAS-TL, O-acetylserine (thiol) lyase; PGM, phosphoglucomutase; PHS, alpha-glucan phosphorylase; PIFI, post-illumination chlorophyll fluorescence increase; Prx, 2-cys peroxiredoxin; PSI, photosystem I; PSII, photosystem II; RBP, RNA binding protein; SOD, superoxide dismutase; ST5B, desulfoglucosinolate sulfotransferase; SUR, superroot; TCA, tricarboxylic acid; TF, transcription factor; TIL, temperature-induced lipocalin; TLP, thylakoid lumenal protein; Trx, thioredoxin; TSP, thylakoid soluble phosphoprotein.…”

Tβ4 mRNA and protein expression during odontoblastic differentiation of HDPCs. by Sang-Im Lee (403297)

“…Transfection with Tβ4 siRNA decreases OM-induced odontoblastic differentiation but not affected cell growth. …”

GPC3 enhances the IGF-II-triggered IGF-1R phosphorylation by Wei Cheng (52808)

“…Either wild-type GPC3 (WT-GPC3), RR → AA or P25-29A was expressed in HEK293 cells. Transiently transfected cells were serum starved and then treated with IGF-II (20 ng/ml) for 5, 15, 30 or 60 min at 37°C, followed by western blot probed with anti-phospho-IGF-1Rβ and reprobed with anti-IGF-1R. …”

Aluminum stress tolerance in potato genotypes grown with silicon by Athos Odin Severo Dorneles (6304865)

“…Plants of the Al-sensitive genotype (SMIJ319-7) and Al-tolerant genotype (SMIF212-3) were grown for two weeks in a hydroponic system with the nutrient solution containing combinations of Al (0 and 1.85 mM) and Si (0, 0.5 and 1.0 mM). …”

Gain and loss of Miple expression affect lifespan in <i>Drosophila</i>. by Fredrik Hugosson (252549)

“…<p>(<b>A</b>) Loss of Miple proteins affect lifespan. …”

Integrated view of genome-wide gene expression and DNA and histone methylation patterns. by Reo Maruyama (52782)

“…<p>(A) Genomic regions (+/− 5 kb and +/− 0 kb from DMR for K27 and K4, respectively) associated with DMRs in one cell type (e.g., CD44+ cells) are enriched for K4 or K27 mark in the other (e.g., CD24+ cells). …”

ATP release differs in normal versus dystrophic muscle fibers. by Denisse Valladares (489234)

“…(C) Quantification of maximum ATP release (first peak) induced by ES in the presence of different Pannexin inhibitors. 100 µM oleamide (Olea), 5 µM carbenoxolone (Cbx) and 100 µM ¹⁰Pnx1 prevented ES-induced ATP release in normal fibers and decreased basal levels of ATP release in dystrophic fibers. …”

NLRP3 expression was involved in the accumulation of NPC-LMP1-mediated MDSCs. by Ting-Ting Cai (1749844)

“…<p>(<b>A</b>) Representative immunoblots of CNE2-LMP1 and TW03-LMP1 cells treated with siNC or siNLRP3 and stained with the indicated antibodies (n = 3). …”

Sustaining rainforest remnants in plantation landscapes: degree of oil palm stand-induced edge effects on forest microclimate and regeneration by Genta Permana (14273873)

“…Significant differences were mostly observed only for variables at the forest fringe, and the reduction in edge influence was most prominent only with a minimum stand height of 8.5 m. Invasive undergrowth species penetrated less into the forest interior with more shade. …”

EFFECT OF CHRONIC INGESTION OF WINE ON THE GLYCEMIC, LIPID AND BODY WEIGHT HOMEOSTASIS IN MICE by Sebastião Barreto de BRITO-FILHO (10390814)

“…The concentration of cholesterol was lower in the WG (23.6%), as well as EG (24.5%, p<0.05). The concentration of glycogen was higher in WG (16%) and fasting blood glucose was higher in EG compared to the other groups but not both demonstrated a statistically significant difference. …”

Equatorenes: Synthesis and Properties of Chiral Naphthalene, Phenanthrene, Chrysene, and Pyrene Possessing Bis(1-adamantyl) Groups at the Peri-position by Koji Yamamoto (505190)

“…Chiral polycyclic aromatic hydrocarbons containing bis­(1-adamantyl) groups at the peri-positions, named equatorenes, were synthesized in optically pure form starting from optically pure 4,5-bis­(1-adamantyl)-8-methoxy-1-naphthol. A sequential Diels–Alder reaction of furan and arynes generated from 1,2-bromotriflates provided tricyclic and tetracyclic epoxides, and acid-catalyzed aromatization gave phenanthrol and chrysenol. …”

Air-Adapted <i>Methanosarcina acetivorans</i> Shows High Methane Production and Develops Resistance against Oxygen Stress by Ricardo Jasso-Chávez (120236)

“…<div><p><i>Methanosarcina acetivorans</i>, considered a strict anaerobic archaeon, was cultured in the presence of 0.4–1% O₂ (atmospheric) for at least 6 months to generate air-adapted cells; further, the biochemical mechanisms developed to deal with O₂ were characterized. …”

DataSheet_1_Global thyroid cancer incidence trend and age-period-cohort model analysis based on Global Burden of Disease Study from 1990 to 2019.csv by Le Xu (102322)

“…In 2019, The global age-standardized incidence rate (ASIR) of TC in the 5 SDI countries all showed a significant upward trend, with the largest upward trend in the middle SDI countries.…”

The length of lutein treatment in rMC-1 cells upon CoCl₂-induced hypoxia. by Frederic K. C. Fung (164563)

“…Lutein improved rMC-1 cell survival by decreasing Bax/Bcl-2 ratio at 24 hours. n = 5 in each group. …”

Image_1_Xiaochaihutang Inhibits the Activation of Hepatic Stellate Cell Line T6 Through the Nrf2 Pathway.TIF by Rui Hu (505795)

“…Rats in treatment groups were given the appropriate doses of XCHT granules (5 g/kg) and Silybin (50 mg/kg) for 6 days, and the serum were obtained. …”

Equatorenes: Synthesis and Properties of Chiral Naphthalene, Phenanthrene, Chrysene, and Pyrene Possessing Bis(1-adamantyl) Groups at the Peri-position by Koji Yamamoto (505190)

“…Chiral polycyclic aromatic hydrocarbons containing bis­(1-adamantyl) groups at the peri-positions, named equatorenes, were synthesized in optically pure form starting from optically pure 4,5-bis­(1-adamantyl)-8-methoxy-1-naphthol. A sequential Diels–Alder reaction of furan and arynes generated from 1,2-bromotriflates provided tricyclic and tetracyclic epoxides, and acid-catalyzed aromatization gave phenanthrol and chrysenol. …”