Hierarchical cluster analysis of differentially expressed genes in AT-MSCs from three different donors in CC1 or CC2. by Dae Seong Kim (506081)

“…CC1, cultures plated with an initial cell density of 200 cells/cm² and a culture duration of 7 days; CC2, cultures plated with an initial cell density of 5,000 cells/cm² and a culture duration of 7 days.…”

Data_Sheet_1_Investigation of the genetic effect of 56 tobacco-smoking susceptibility genes on DNA methylation and RNA expression in human brain.docx by Zhongli Yang (9750611)

“…An eQTL was revealed to significantly affect EGLN2 expression in the European sample and two mQTLs were respectively detected in CpG sites in NRXN1 and CYP2A7. Interestingly, we found for the first time that the minor allele of the single nucleotide polymorphism (SNP) rs3745277 located in CYP2A7P1 (downstream of CYP2B6) significantly decreased methylation at the CpG site for CYP2A7 (cg25427638; P = 5.31 × 10^–7), reduced expression of CYP2B6 (P = 0.03), and lowered the percentage of smokers (8.8% vs. 42.3%; Odds Ratio (OR) = 0.14, 95% Confidence Interval (CI): 0.02–0.62; P = 4.47 × 10^–3) in a dominant way for the same cohort sample. …”

Integrative Omics analyses reveal epigenetic memory in diabetic renal cells regulating genes associated with kidney dysfunction. by Ada Admin (8524211)

“…Furthermore, the downregulation of several TAGs in T2D (including <i>CLDN10</i>, <i>CLDN14</i>, <i>CLDN16</i>, <i>SLC16A2</i>, <i>SLC16A5</i>) was associated with promoter hypermethylation, decreased chromatin accessibility and reduced enrichment of HNF4A, histone H3-lysine-27-acetylation, and CTCF. …”

Predator-Induced Demographic Shifts in Coral Reef Fish Assemblages by Benjamin I. Ruttenberg (217118)

“…We examined patterns of abundance, size structure, and age-based demography through surveys and collection-based studies of five fish species from a variety of trophic levels at Kiritimati and Palmyra, two nearby atolls in the Northern Line Islands. …”

Image_3_The Effects of Temperature Acclimation on Swimming Performance in the Pelagic Mahi-Mahi (Coryphaena hippurus).pdf by Rachael M. Heuer (4623886)

“…Aerobic scope and U_crit were highest in 28°C-acclimated fish. 20°C-acclimated mahi experienced significantly decreased aerobic scope and U_crit relative to 28°C-acclimated fish (57 and 28% declines, respectively). 32°C-acclimated mahi experienced increased mortality and a significant 23% decline in U_crit, and a trend for a 26% decline in factorial aerobic scope relative to 28°C-acclimated fish. …”

Biosynthesis and Thermal Properties of PHBV Produced from Levulinic Acid by <i>Ralstonia eutropha</i> by Yuanpeng Wang (122052)

“…<div><p>Levulinic acid (LA) can be cost-effectively produced from a vast array of renewable carbohydrate-containing biomaterials. …”

Image_1_Central Treatment of Ketone Body in Rainbow Trout Alters Liver Metabolism Without Apparently Altering the Regulation of Food Intake.pdf by Sara Comesaña (5689613)

“…Using rainbow trout (Oncorhynchus mykiss) as a model, we intracerebroventricularly (ICV) administered 1 μl 100 g^–1 body mass of saline solution alone (control) or containing 0.5 μmol of BHB. …”

Presentation_1_Investigation of the genetic effect of 56 tobacco-smoking susceptibility genes on DNA methylation and RNA expression in human brain.PPTX by Zhongli Yang (9750611)

“…An eQTL was revealed to significantly affect EGLN2 expression in the European sample and two mQTLs were respectively detected in CpG sites in NRXN1 and CYP2A7. Interestingly, we found for the first time that the minor allele of the single nucleotide polymorphism (SNP) rs3745277 located in CYP2A7P1 (downstream of CYP2B6) significantly decreased methylation at the CpG site for CYP2A7 (cg25427638; P = 5.31 × 10^–7), reduced expression of CYP2B6 (P = 0.03), and lowered the percentage of smokers (8.8% vs. 42.3%; Odds Ratio (OR) = 0.14, 95% Confidence Interval (CI): 0.02–0.62; P = 4.47 × 10^–3) in a dominant way for the same cohort sample. …”

Supplementary Material for: Post-operative severity assessment in sheep by Zentrich E. (13103193)

“…Methods: Telemetric devices were implanted in a first surgery subcutaneously into four German blackheaded mutton ewes (4-5 years, 77-115kg). …”

Generation of <i>fgf22</i> knockout mice. by Monika Jarosz (156537)

“…<i>Fgf22</i> wt (+/+) samples show a single band at 286 bp (mice 1, 3 and 4), <i>fgf22</i> ko (−/−) display a single ko allele at 130 bp (mice 2 and 7) and heterozygous (+/−) samples amplify both wt and ko alleles (mice 5, 6 and 8). …”

Table 2_Elucidating the impact of organic amendments on soil bacterial communities and strawberry yield in North Carolina.xlsx by Tika B. Adhikari (9310247)

“…S. A. The main objective of the study was to examine the effects of reduced rates of dried molasses (5.60 t/ha) and mustard meal (2.24 t/ha), a half-rate combination of both, a positive control (Pic Clor 60), and a negative control (no fumigated and no amended) on soil bacterial communities and strawberry yield. …”

Migration frameworks in Africa by Alemu Asfaw Nigusie (16962900)

“…<p>Migration has become a prominent issue in the international agenda in recent years due to the rise in its intensity and impact (actual/perceived) on national and international affairs. …”

NOTCH1 Gain of Function in Germ Cells Causes Failure of Spermatogenesis in Male Mice by Zaohua Huang (439674)

“…Spermatogenesis in these mutants was progressively affected with age, resulting in decreased testis weight and sperm count. Analysis of downstream target genes of NOTCH1 signaling showed an increased expression of <i>Hes5</i>, with a reduction of the spermatogonial differentiation marker, <i>Neurog3</i> expression in the mutant testis. …”

Summary of different review. by Biniam Alemayehu (22530422)

“…Results show that the proposed method reduces active power losses by 72.064%, decreases voltage deviation from 24.63% to 4.5% and improves the minimum bus voltage from 0.7537 pu to 0.9550 pu. …”

Phytochemical analysis and fungicide potential of Pouteria ramiflora against Lasiodiplodia theobromae by Ademir Kleber M Oliveira (4771896)

“…The experimental design was completely randomized with five replications, and the treatments were constituted of a factorial of seven extracts/fractions and six concentrations. …”

Table_3_The Effects of Temperature Acclimation on Swimming Performance in the Pelagic Mahi-Mahi (Coryphaena hippurus).docx by Rachael M. Heuer (4623886)

“…Aerobic scope and U_crit were highest in 28°C-acclimated fish. 20°C-acclimated mahi experienced significantly decreased aerobic scope and U_crit relative to 28°C-acclimated fish (57 and 28% declines, respectively). 32°C-acclimated mahi experienced increased mortality and a significant 23% decline in U_crit, and a trend for a 26% decline in factorial aerobic scope relative to 28°C-acclimated fish. …”

Depletion of the Chromatin Looping Proteins CTCF and Cohesin Causes Chromatin Compaction: Insight into Chromatin Folding by Polymer Modelling by Mariliis Tark-Dame (641719)

“…PLoS ONE 5: e12218.). We show that compaction can be explained by selectively decreasing the number of short-range loops, leaving long-range looping unchanged. …”

Data Sheet 1_Role of RGS17 in cisplatin-induced cochlear inflammation and ototoxicity via caspase-3 activation.zip by Raheem F. H. Al Aameri (14951800)

“…C57BL/6J mice treated with two cycles of cisplatin (3.5 mg/kg) showed a significant elevation in ABR thresholds, along with loss of outer hair cells and inner hair cells synapse. …”

Dataset: Global oyster reef restoration and recovery by Deevesh Ashley Hemraj (9058922)

“…We found that whilst restoration initiates a rapid increase in biodiversity and abundance of 2- to 5-fold relative to unrestored habitat, recovery rate decreases substantially within a few years post-restoration and accumulated global recovery debt persists at >35% per annum. …”

Data_Sheet_1_Rufomycin Exhibits Dual Effects Against Mycobacterium abscessus Infection by Inducing Host Defense and Antimicrobial Activities.doc by Cho Rong Park (11253450)

“…This study shows that the rufomycins 4/5/6/7 (Rufomycin 4–7), which targets ClpC1 as a subunit of caseinolytic protein complex ClpC1/ClpP1/ClpP2 of mycobacteria, exhibits a dual effect in host innate defense and in vivo antimicrobial activities against a rough morphotype of Mycobacterium abscessus (Mabs-R), a clinically severe morphotype that causes hyperinflammation. …”