Equilibrium and peptide binding data for cp- and pwtSAP97PDZ2. by Greta Hultqvist (118920)

“…</b> cpSAP97 PDZ2 binding trace at 10 µM peptide fitted to a single exponential function. …”

Predicting human genotype-phenotype relations from functional genomics data. by Peter N. Robinson (231343)

“…Resnik's <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1004268#pgen.1004268-Resnik1" target="_blank">[78]</a> measure, together with the GraSM approach <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1004268#pgen.1004268-Couto1" target="_blank">[79]</a>, was used to calculate the similarity of terms organised in these hierarchical ontologies, defining the semantic similarity between any two terms as the average information content of their disjunct common-ancestor terms. …”

Block diagram of the signal transduction model in medium spiny neurons. by Takashi Nakano (253277)

“…Detailed information on the regulatory pathways is provided in the <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1000670#s2" target="_blank">Materials and Methods</a> section, and the rough sketch of the signal flow is as follows. …”

Quantitative data showing that FGF2 treatment delays tectal neurogenesis. by Luke D. McGowan (483282)

Figure S1, NSCLC cell lines analyzed and p53 status. by Michela Garofalo (276614)

“…Tables reporting the percentage of miR-34a, PDGFR-α and PDGFR-β expression observed in the 106 (PDGFR-α) and 107 (PDGFR-β) tumor samples analyzed (A case with 10% of the tumor cells + was scored as +). …”

ROI with increasing variance of multiplicative noise and resulting accuracy. by Enrico Lanza (15993785)

“…The length of the white bar represents 10 <i>μ</i>m. Panel B shows the resulting plot of the accuracy as a function of noise variance: it is initially relatively stable and then decreases for higher values of noise from about 0.70 to about 0.60.…”

Data_Sheet_1_Regulation of Gramicidin Channel Function Solely by Changes in Lipid Intrinsic Curvature.PDF by Andreia M. Maer (12210422)

Effects of fSTR variants on RNA accessibility for MFE secondary structures. by Nick Kinney (8119937)

“…(c) Accessibility increases with allele length for non-reverse complementary repeats: <i>r = 0.017, p = 1.3e-10</i>. (d) Accessibility decreases with allele length for reverse complementary sequences: <i>r = −0.214, p = 0</i>.…”

PZQ-evoked bipolarity is Ca²⁺-dependent. by Taisaku Nogi (113790)

“…<p>(A) Effect of increasing medium Ca²⁺ concentration ([Ca²⁺]_out: left, Ca²⁺ free (1 mM EGTA); right, 1 µM to 10 mM) on bipolarity evoked by PZQ (24 hr exposure). …”

Prognostic value of “stroma up” genes in different human tumors. by Marina Bacac (67529)

“…<div><p>(A) Unsupervised hierarchical clustering of breast cancer patients (columns) obtained using “stroma up” genes (rows) ordered according to decreasing z values (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0000032#pone.0000032.s008" target="_blank">Table S5</a>).…”

Effect of temperature on firing rate and total energy usage for the cortical model neuron in response to different intensities of DC input. by Yuguo Yu (172221)

“…The total sodium charge entering during one action potential decreases exponentially as a function of temperature for DC = 0.5, 1, 1.5 and 2×10⁻² pA/µm², respectively. …”

Table 1_Revised Peck’s formula for estimating pipeline’s settlement under the coupling effect of tunnelling and vehicle load.xlsx by Shu Peng (642390)

“…The results reveal that the settlement of soil and pipeline caused by tunnelling decreases with decreasing burial depth; the dynamic settlement of the sewage pipe and ground surface is decreasing rapidly as the burial depth increases. …”

Cophylogenetic signal occurs between diverse gut fungal taxa and hominids (continued from Fig 3). by Emily P. Van Syoc (22169869)

“…<p><b>(A–E)</b> Neighbor-joining trees of fungal OTUs that display cophylogeny with hominid hosts, ordered by decreasing PACo R2. …”

Presentation_1_Oxalate Alters Cellular Bioenergetics, Redox Homeostasis, Antibacterial Response, and Immune Response in Macrophages.pptx by Parveen Kumar (428921)

“…In contrast, oxalate significantly decreased the mRNA levels and secretion of the anti-inflammatory cytokine, Interleukin-10 (IL-10). …”

Linear repression using auto-regulation. by Rutger Hermsen (195605)

“…<p>If in the simulations we selected for a linearly decreasing response function (a LIN gate), auto-activation emerged. …”

Expression of 95 pairs of TF paralogs in 23 non-redundant human tissues. by Larry N. Singh (76540)

“…The (RXRB-RXRB) pair in fact corresponds to two distinct (partially overlapping) Ensembl genes. See <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0002345#pone.0002345.s002" target="_blank">Data file 2</a> for Ensembl gene ids.…”

Temporal quantitative gene expression changes in discovery samples over gestational weeks 5–18. by Liis Uusküla (121629)

“…(A) 14 genes with significant change in transcription (ANOVA, FDR corrected <i>P</i><0.05, <i>n</i> = 10) and (B) additional 10 genes with known effect on pregnancy that showed mildly significant differential expression (FDR corrected <i>P</i><0.1) were selected for subsequent RT-qPCR analysis (<b><a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0049248#pone.0049248.s011" target="_blank">Table S2</a></b>). …”

Mycobacterial regulation of TLR-induced cytokines. by Nataliya Lutay (241210)

“…Blocking with TLR2 or addition of 19-kDa to the epithelial cells did not induce a significant change on epithelial IL-10 production compared to mycobacteria. …”

Effect of E protein on the recognition of prM protein by human anti-prM mAbs. by Wen-Yang Tsai (108058)

“…<p>(A) Binding specificity of 4 human anti-prM mAbs including 2 CR (DVB59.3 and DVB18.5) and 2 sCR (DVB65.5 and DVB32.4) mAbs was determined as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0052600#pone-0052600-g005" target="_blank">Figure 5</a>. …”

Immunofluorescence localization of SR in ipsilateral dorsal horn changes after formalin injection. by Ayako Tabata-Imai (617411)

“…<p>(A-C) In WT mice, SR (green) is predominantly distributed in lamina II of the dorsal horn before formalin injection (0 min), and its signal density decreases over time after the injection (A1-C1). …”