Chromatin modifiers act differentially on nonspecific genes. by Mónica Chagoyen (4253800)

“…For each modifier, we plotted its mean effect, after mutation, on the genes constituting the negative (red circle), invariant (brown circle), or positive (blue circle) sectors. A kernel density plot corresponding to a null distribution obtained by permutation is also shown (<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1007353#sec013" target="_blank">Methods</a>). …”

Preexisting frequency preference determines the effects of tACS. by Matthew R. Krause (9450334)

“…<p><b>(A)</b> Histogram of narrowband preferred frequency for the 47 V4 neurons with significantly decreased entrainment during 5 Hz tACS. …”

Resonant and non-resonant layer II ACo neurons. by Jorge Vera (432199)

“…<i>A</i>, Voltage response to a 10 s ZAP stimulus (lower trace) of 10 pA amplitude and linearly decreasing frequency (15–0 Hz), at different membrane potentials. …”

Effect of blue photon fraction on canopy photosynthesis. by F. Mitchell Westmoreland (10357924)

“…The system used to make measurements has been described previously [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0248988#pone.0248988.ref014" target="_blank">14</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0248988#pone.0248988.ref015" target="_blank">15</a>], and references cited therein]. …”

Effect of resveratrol or/and nicotinamide on extracellular matrix, Runx2 and PPAR-γ expression during osteogenesis of MSC and pre-osteoblastic cells in high-density cultures. by Mehdi Shakibaei (325455)

“…Untreated cultures (without resveratrol or nicotinamide) produced collagen type I (a, A–B) and Runx2 (b, A–B) in both cultures. Incubation with nicotinamide reduced collagen type I and Runx2 production and increased the expression of PPAR-γ in a concentration dependent manner in MSC-cultures (c, A) and decreased the expression of PPAR-γ in a concentration dependent manner in pre-osteoblastic cultures (III, B). …”

Purification and quantification of pro-mature BMP15. by Jaqueline Sudiman (603767)

“…The pro-region appeared as two ∼40 KDa bands and the mature region as a ∼16 KDa band and as a ∼17 KDa band that has been reported to be O-linked glycosylated <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0103563#pone.0103563-Saito1" target="_blank">[68]</a>. …”

Schematic of the model. by Ben D. Fulcher (540455)

“…The circadian drive, , which originates in the suprachiasmatic nucleus (SCN), is afferent to both VLPO (inhibition) and Orx (excitation) <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0091982#pone.0091982-Saper1" target="_blank">[4]</a>, while the homeostatic sleep drive, , which increases during wake and decreases during sleep, disinhibits VLPO <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0091982#pone.0091982-Morairty1" target="_blank">[63]</a>. …”

Strategy regimes for different spatio-temporal scales of imitation. by Jaideep Joshi (4422628)

“…In panels A and B, the sedentary and mobile yield-maximizing harvesting rates (<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1007483#pcbi.1007483.s003" target="_blank">S2 Appendix</a>) are indicated, respectively, by the unlabeled tick marks in the blue and green ranges of the color bars. …”

Local parameter sensitivity analysis with respect to <i>SSR</i>_<i>Sum</i>. by Antonello Caruso (5310080)

“…Boxes indicate parameters that were optimized during the iterative parameter optimization (<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1008139#pcbi.1008139.t001" target="_blank">Table 1</a>, <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1008139#pcbi.1008139.s002" target="_blank">S2 Fig</a>).…”

Expression of iNOS, COX-2 and apoptotic levels in organotypic cultures of ventral mesencephalon. by Irene Paterniti (310894)

“…Values are mean ± SEM (N = 10 animals per group). a1) ** p < 0.01 vs Sham; ## p < 0.01 vs MPTP; b1) *** p < 0.001 vs Sham; ### p < 0.001 vs MPTP. …”

PARP inhibition down-regulates vimentin expression and inhibits endothelial-to-mesenchymal transition in HUVECs. by María Isabel Rodríguez (421537)

“…<p>Cell extracts from HUVEC either treated with vehicle or 40 µM DPQ were subjected to 2D electrophoresis as described in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1003531#s4" target="_blank">Materials and Methods</a>. …”

Measured effectiveness and fraction of infected individuals versus time. by Antonio Scala (302212)

“…Upper panel: the effectiveness <i>η</i>(<i>t</i>) measured as <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0290652#pone.0290652.e024" target="_blank">Eq 9</a> on a series of <i>T</i> = 2 months trials starting at different times <i>t</i> for a vaccine with <i>true</i> efficacy <i>ϵ</i> = 90%. …”

Interference assay with reconstituted Cascade complexes. by Michael Daume (620033)

“…A decreased cleavage activity can be observed for the Cascade complexes containing the Csa5 mutants. …”

Value-dependent decision-making over equal alternatives. by Darren Pais (452991)

“…Increasing the strength of cross-inhibition above the critical threshold , this attractor becomes unstable and two stable attractors, one for each alternative, emerge from it and rapidly move apart <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0073216#pone.0073216-Seeley2" target="_blank">[13]</a>; in this situation one alternative will thus be chosen at random by the system. …”

Additive effects of ASM-024 on beta2-agonists airway smooth muscle relaxation in dog bronchi. by Evelyne Israël-Assayag (709530)

“…ASM-024-induced bronchial relaxation required higher concentrations than the β2-AR agonist salbutamol (EC50 = 45.21 ± 13.74 μM for ASM-024 vs EC50 = 1.75 ± 1.83 μM for salbutamol). Salbutamol decreased the tension of precontracted dog bronchi by a maximum of 53%; the addition of 10–3 M ASM-024 further relaxed bronchial rings to below the applied basal tension. …”

Network performance under variable learning conditions. by Ann M. Hermundstad (215324)

“…<p>CDFs of are shown given (a) unlimited and (b) limited training time for the five networks shown in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1002063#pcbi-1002063-g001" target="_blank">Figure 1(a)</a>. …”

COG-scores calculations depend on genome group size. by Alexander M. Kloosterman (9910104)

“…<p><b>(</b>A) As the minimum number of trueCOGs increases, the number of genomes that can be analyzed together (red line) decreases. …”

Tree growth and survival versus N deposition by species and colored by ecological attributes. by Kevin J. Horn (5870411)

“…The relationships are separated by general curve shape; The (a,d) increasing, (b,e) unimodal, and (c,f) decreasing relationships with N deposition are shown. …”

Sensitivity and specificity of fusion gene predictions. by Ali Bashir (44572)

“…<p>(A) Number of false positive (FP) and true positive (TP) fusion gene predictions for a simulated genome with 100 translocations and 10,000 paired reads. …”

Sensitivity of the long-term reduction in microfilarial load in individuals under 20 years of age to the assumed rate of decay of vaccine efficacy. by Hugo C. Turner (407442)

“…Other assumptions as in <a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0003938#pntd.0003938.g004" target="_blank">Fig 4</a>.…”