Figure S7 - Heatmap of genes in LPS Biosynthesis by Scott G. Daniel (4051720)

“…S+H-), and combined effect (S-H+ vs. S+H-). Fold changes are mapped to a Blue-Yellow color spectrum with bright yellow having the greatest increase in RNA counts and bright blue having the greatest decrease in RNA counts in the given condition versus control. …”

Figure S9 - Heatmap of genes in OXPHOS pathway by Scott G. Daniel (4051720)

“…S+H-), and combined effect (S-H+ vs. S+H-). Fold changes are mapped to a Blue-Yellow color spectrum with bright yellow having the greatest increase in RNA counts and bright blue having the greatest decrease in RNA counts in the given condition versus control. …”

Figure S2 - Heatmap of genes in Butyrate Metabolism by Scott G. Daniel (4051720)

“…S+H-), and combined effect (S-H+ vs. S+H-). Fold changes are mapped to a Blue-Yellow color spectrum with bright yellow having the greatest increase in RNA counts and bright blue having the greatest decrease in RNA counts in the given condition versus control. …”

Significant downregulation of <i>Cebpe</i> in human <i>Evi1</i> overexpressed leukemic cells. by Carolyn Glass (427882)

“…U937+<i>Evi1</i> cells had 8 point increase in Ct value (or 256 fold decrease) compared to the U937 wildtype cells (p<0.001).…”

Validation of gelatin zymography. by Anke Tscheuschler (51872)

“…Protein extracts were diluted from 2fold until 16fold. The measured pixel density in the zymograms showed a linear decrease at dilution factors between 2fold and 8fold. …”

Knock down of contactin-2 expression after spinal cord injury retards locomotor recovery after spinal cord injury. by Jin-Fei Lin (292515)

“…(B) Intensity of the bands as quantified by ImageJ software, and fold change compared with control MO treated group shows a decrease in contactin-2 protein level at 10 days after application of contactin-2 MO (*p<0.05, Student’s t-test; n = 5 fish/group). …”

Basal LDLR gene expression and activity is higher in PC-3 than LNCaP cells. by James Robert Krycer (104817)

“…Expression is represented as a fold change (relative to PC-3 cells), whereby a one-unit increase in ΔC_t results in a two-fold decrease in mRNA expression. …”

HuR regulates expression of Eph/ephrins. by Jennifer Winter (87429)

“…Quantification of bands (Against GAPDH) was performed using the Image Quant software 5.2 (lower panel). Fold increase or decrease of expression are depicted.…”

Heat map of gene expression level comparing untreated 3D cultures to 2D cultures (3D+EtOHvs2D+EtOH). by Shirly Sieh (139080)

“…The fold change between −1.5 to +1.5 is considered not significant (NS). …”

Data_Sheet_1_Constant-Moderate and High-Intensity Interval Training Have Differential Benefits on Insulin Sensitive Tissues in High-Fat Fed Mice.PDF by Sergio F. Martinez-Huenchullan (6632717)

“…In contrast, HIIT but not END reversed the HFD-driven decrease in the adiponectin receptor 1 (AdipoR1). In SAT, both programs tended to decrease collagen VI protein (p = 0.07–0.08) in HFD, whereas only HIIT induced an increase in the mRNA (3-fold vs. …”

Supplementary Material for: Dietary Protein and Fiber Affect Gut Microbiome and Treg/Th17 Commitment in Chronic Kidney Disease Mice by Serrano M. (4141276)

“…As compared with HP-LF mice, LP-HF mice had 1.7-fold increase in CD4+Foxp3+Treg cells in spleen and 2.4-fold increase of these cells in peripheral blood. …”

HuR potently and persistently represses IGF-IR IRES-mediated translation initiation by Zheng Meng (9293)

“…Note that a two log decrease in efficiency of IRES-mediated translation in the presence of HuR is maintained throughout the course of the experiment.…”

Influence of MgCl and ATP on primer unblocking by AZT-resistant RT by Valérie Goldschmidt (13343)

“…The decrease of the band intensity relative to the first time point (5 min) is plotted against the reaction time.…”

Figure 6 by Kevin T. Williams (353973)

“…*p<0.05 c.f. time point matched untreated control a p<0.05 c.f. treatment matched 4 hour time point.…”

The increased myeloid priming of Id1 null HSCs requires the expression of p21 by Alessia Ciarrocchi (37383)

“…<p>. A–B) In vitro differentiation of sorted HSCs in response to cytokine stimulation. …”

Random forest identified stop codon identity, P-site amino acid identity, and 3’-UTR length as factors critical in readthrough efficiency prediction. by Kotchaphorn Mangkalaphiban (9767180)

“…<p><b>A.</b> Performance metric for random forest regression displaying average Normalized Root Mean Squared Error (NRMSE) ± standard deviation across 5-fold cross-validation. …”

Cytochrome <i>c</i> release is inhibited by insulin administration. by Thomas H. Sanderson (479898)

“…After 8 min of ischemia followed by 24 h of reperfusion (R24, n = 5) cytosolic Cyt<i>c</i> increases ∼4 fold (p < 0.05) and there is a trend toward mitochondrial Cyt<i>c</i> decrease (p = 0.08), both indicative of mitochondrial Cyt<i>c</i> release. …”

Simulation of evolution with strong interference. by Daniel B. Weissman (159534)

“…The mean increases as well, but by no more than a factor of two, much less than might be suggested by the 15-fold decrease in fixation probability. …”

MAC and RYT treatments evolved different metabolite production and consumption profiles. by Nerve Zhou (3830020)

“…<p>(A) Ratio (fold change) of ethanol yields of clones selected from MAC and RYT with respect to the ancestor is presented here. …”

Functional analysis of homeodomain-mutant Caup proteins. by Natalia Barrios (212940)

“…Caup^cyc* (K, K’) and Caup^IRO·box* (L, L’) cell- autonomously repress <i>fng</i> expression (arrows) (The apparent decrease in <i>fng</i> expression around the clones over expressing Caup^cyc* or Caup^IRObox* is due to the epithelial folds that surround them, as previously shown for <i>caup</i> over-expressing clones [<a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1005463#pgen.1005463.ref060" target="_blank">60</a>]). …”