Data_Sheet_2_Recto-Anal Junction (RAJ) and Fecal Microbiomes of Cattle Experimentally Challenged With Escherichia coli O157:H7.zip by Raies A. Mir (8087384)

“…Cattle were either orally challenged (n = 4) with10¹⁰ CFU of a streptomycin-resistant O157 strain 86–24, or mock-challenged (n = 4) with phosphate buffered saline. …”

Data_Sheet_1_Recto-Anal Junction (RAJ) and Fecal Microbiomes of Cattle Experimentally Challenged With Escherichia coli O157:H7.zip by Raies A. Mir (8087384)

“…Cattle were either orally challenged (n = 4) with10¹⁰ CFU of a streptomycin-resistant O157 strain 86–24, or mock-challenged (n = 4) with phosphate buffered saline. …”

Datasheet1_Delayed acquisition of airway commensals in antibiotic naïve children and its relationship with wheezing in rural Ecuador.docx by Paul A. Cardenas (16810500)

“…Most of the core and accessory organisms increased in abundance and prevalence with age, except for a few which decreased. At 7 months of age, infants with wheeze had notably higher levels of a single Streptococcus operational taxonomic unit and core microbiota member than controls.…”

Three nonhormetic responses do not equal hormesis by Kristina A. Thayer (12249)

Acss2/HIF-2 regulates cancer-associated factors in HT29 cells. by Joseph A. Garcia (7865855)

“…Comparison of samples within a given condition was performed by one-way ANOVA followed by Dunnett’s multiple comparisons test using control shRNA knockdown/control rescue as reference with decreased samples noted (*, P<0.05). …”

Acss2/HIF-2 regulates cancer-associated factors in HCT116 cells. by Joseph A. Garcia (7865855)

“…Comparison of samples within a given condition was performed by one-way ANOVA followed by Dunnett’s multiple comparisons test using control shRNA knockdown/control rescue as reference with decreased samples noted (*, P<0.05). …”

<i>Sln</i> deletion does not augment proteolytic activity and autophagic signaling in response to <i>Pln</i> overexpression. by Val A. Fajardo (497884)

“…<p>Calpain (A), caspase-3 (B), and 20S proteasome activity assays (C). …”

Supplementary Material for: Posterior Approach in Management of Phacomorphic Angle Closure by Ichsan A.M. (11324472)

Read ratios for each gene (PA14 genome) in the PYO tolerance Tn-seq experiment. by Lucas A. Meirelles (10284499)

“…Ratios = reads + PYO conditions / reads no PYO condition (log₂ transformed), where high ratio values = increased fitness and low ratio values = decreased fitness. CIP Tn-seq values are from Cameron and colleagues [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3001093#pbio.3001093.ref024" target="_blank">24</a>] (see <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3001093#sec009" target="_blank">Methods</a>). …”

Determination of key nodes of the USA Western Power Grid network. by István A. Kovács (242616)

“…Nodes were removed in the order of their decreasing degree (black alternating dashes and dots) betweenness centrality <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0012528#pone.0012528-Girvan1" target="_blank">[2]</a> (red dashed lines) or “bridgeness” (solid blue lines), where “bridgeness” measures the overlap of the given node between different modules as described in detail in Section V.6.d. in the <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0012528#pone.0012528.s001" target="_blank">Electronic Supplementary Material S1</a>. …”

Table_1_Algal amendment enhances biogenic methane production from coals of different thermal maturity.DOCX by George A. Platt (14770780)

“…Here, we show that biogenic methane can be produced from five coals ranging in rank from lignite to low-volatile bituminous using a coal-derived microbial consortium in batch microcosms with and without algal amendment. …”

Investigating specificity of the anti-hypertensive inhibitor WNK463 against With-No-Lysine kinase family isoforms via multiscale simulations by Nisha A. Jonniya (6629630)

Dysregulation of Na+/K+ ATPase by amyloid in APP+PS1 transgenic mice-1 by Chad A Dickey (26939)

Fluo-PHB but not fluorescein or fluo-DB induces mitochondrial membrane depolarization. by Pia A. Elustondo (461882)

Wells of polystyrene plates coated with gp120 IIIB were incubated with 4-fold diluted PJ for 1 h at 37°C by A Robert Neurath (26779)

The small molecule Mek1/2 inhibitor U0126 disrupts the chordamesoderm to notochord transition in zebrafish-6 by Thomas A Hawkins (75712)

Data_Sheet_1_The Cytochrome bd Complex Is Essential for Chromate and Sulfide Resistance and Is Regulated by a GbsR-Type Regulator, CydE, in Alishewanella Sp. WH16-1.PDF by Xian Xia (398501)

“…In this study, we investigated the chromate reduction mechanism of strain WH16-1 through Tn5 transposon mutagenesis. A cytochrome bd (cytbd) Tn5 mutant was generated (Δcytbd), and a detail analysis showed that the following: (1) gene cydE (coding for a GbsR-type regulator) was co-transcribed with the two subunits coding genes of the Cytochrome bd complex (Cytbd), namely, cydA and cydB, based on RT-PCR analysis, and similar gene arrangements were also found in other Alteromonadaceae family strains; (2) the chromate resistance level was dramatically decreased and chromate reduction efficiency also decreased in strain Δcytbd compared to the wild-type and a complemented strain (Δcytbd-C); (3) Cytbd could catalyze the decomposition of H₂O₂ according to the analyses of H₂O₂ decomposition ability, cellular H₂O₂ contents, H₂O₂ inhibition zone, and H₂O₂ sensitivity tests; (4) surprisingly, chromate was not an inducer of the expression of Cytbd, but sulfate induced expression of Cytbd, and sulfate/sulfide resistance levels were also decreased in the Δcytbd strain; (5) the addition of sulfate enhanced the chromate resistance level and reduction efficiency; (6) Cytbd expression was repressed by CydE and derepressed by sulfate based on an in vivo bacterial one hybrid system and in vitro EMSA tests; and (7) DNA footprinting and short-fragment EMSA tests revealed two binding sites of CydE in its promoter region. …”

Implicit task switching in Parkinson’s disease is preserved when on medication by Jacob A. Yaffe (8298813)

Supplementary Material for: Overlapping syndrome of myocarditis, myositis, transaminitis, and myasthenia gravis in patient with hepatocellular carcinoma after treatment with immune... by figshare admin karger (2628495)

Table_1_High-parameter phenotypic characterization reveals a subset of human Th17 cells that preferentially produce IL-17 against M. tuberculosis antigen.pdf by Paul Ogongo (5961161)