Volcano plots. by Joe L. Webb (9596478)

“…<p>Genes upregulated (green) or downregulated (red) by WE consumption, correspond to a 1.5 decrease or increase in log fold changes. …”

Kinase activity. by James W. Bruce (10204626)

“…<p>Kinase activities from the phosphorylation log2 fold changes at 5 min using PhosFate Profiler. PhosFate Profiler computes an enrichment score for kinases using the Kolmogorov–Smirnov statistical test, a p-value, and a kinase activity, where a positive score indicates an increase and a negative score a decrease in kinase activity.…”

Nuclear progestin receptor is up-regulated by estrogen in both the developing and adult brain. by Nicolas Diotel (338556)

“…In A, the aromatase inhibitor (ATD) leads to a significant decrease of <i>pgr</i> expression in individual brains of adult zebrafish (n = 4). …”

3BrP effect on glycolytic enzymes as well as on differentiation markers assessed via embryoid body (EB) formation. by Ana Sofia Rodrigues (491559)

“…Results were normalized to beta-Actin protein levels and are represented as percentage relative to the control; the results represent n = 4. Right: a representative blot demonstrating the decrease in protein levels for glycolytic enzymes. …”

Data Sheet 1_Integrative transcriptome and WGCNA analysis reveal key genes mainly in response to Alternaria alternata in Populus simonii × P. nigra.docx by Siyuan Liu (696701)

“…<p>In order to explore the molecular mechanisms of Populus simonii × P. nigra response to stress and screen for genes conferring resistance to Alternaria alternata, we carried out measurements of physiological and biochemical indices and transcriptomic sequence analysis of leaves of Populus simonii × P. nigra inoculated with A. alternata. The results showed that the variation trends of multiple hormone contents and enzyme activities were broadly similar at different time points, with H₂O₂, SA, JA, PPO, SOD, PAL and POD showing a trend of increasing and then decrease after inoculation with the pathogen. …”

Table 1_Integrative transcriptome and WGCNA analysis reveal key genes mainly in response to Alternaria alternata in Populus simonii × P. nigra.xlsx by Siyuan Liu (696701)

“…<p>In order to explore the molecular mechanisms of Populus simonii × P. nigra response to stress and screen for genes conferring resistance to Alternaria alternata, we carried out measurements of physiological and biochemical indices and transcriptomic sequence analysis of leaves of Populus simonii × P. nigra inoculated with A. alternata. The results showed that the variation trends of multiple hormone contents and enzyme activities were broadly similar at different time points, with H₂O₂, SA, JA, PPO, SOD, PAL and POD showing a trend of increasing and then decrease after inoculation with the pathogen. …”

RyhB binding at Site I and Site II blocks ribosome binding to the <i>msrB</i> translation initiation region. by Julia Bos (411731)

“…<i>msrB_1–450</i> wild type and variants (mut1 and mut2b) were used as a template (5 nM) in the cDNA extension experiment. …”

Undernutrition combined with dietary mineral oil hastens depuration of stored dioxin and polychlorinated biphenyls in ewes. 1. Kinetics in blood, adipose tissue and faeces by Lucille Rey-Cadilhac (8648445)

“…This was concomitant with a decrease by 2.7-fold of the AT estimated lipids weight along the depuration period. …”

Table_2_Flagella-Associated WDR-Containing Protein CrFAP89 Regulates Growth and Lipid Accumulation in Chlamydomonas reinhardtii.DOCX by Qiulan Luo (714763)

“…The fatty acid content in the transgenic algae decreased by 12.4 and 13.3%, mostly decreasing the content of C16:0, C16:4, C18, and C20:1 fatty acids, while the C16:1 fatty acid in the CrFAP89 RNAi lines increased by 238.5 to 318.5%. …”

Table_1_Flagella-Associated WDR-Containing Protein CrFAP89 Regulates Growth and Lipid Accumulation in Chlamydomonas reinhardtii.docx by Qiulan Luo (714763)

“…The fatty acid content in the transgenic algae decreased by 12.4 and 13.3%, mostly decreasing the content of C16:0, C16:4, C18, and C20:1 fatty acids, while the C16:1 fatty acid in the CrFAP89 RNAi lines increased by 238.5 to 318.5%. …”

Repression of miR-29 during outlet obstruction is associated with increased levels of miR-29 target messenger RNAs (mRNAs). by Mari Ekman (168258)

“…<p>Gene expression was assessed (<i>n</i>=6−8) at 10 days and at 6 weeks following outlet obstruction using microarrays and compared with sham-operated controls and with rats where the obstruction had been removed for 10 days. (A) Relative increase (left vs. sham) and decrease (right vs. 6 weeks) of the top 50 mRNA targets of miR-29 when miR-29 was repressed at 10 days and when miR-29 recovered after de-obstruction (c.f. …”

Anterior blind area of the avian visual field. by Luke P. Tyrrell (3320895)

“…If the head width is held constant, then a two-fold increase in the binocular field width results in a five-fold decrease in blind gap length. …”

Fig 3 - by Alexa Petrucciani (13262165)

“…The blue and green bars on the right-hand side represent the ranges of experimental calibration data (calculated from fold changes). The black x is the point used to differentiate between similarly and differentially controlled simulations. …”

Dataset for Mathematical Model of in vitro Hepatocellular Cholesterol and Lipoprotein Metabolism, fig. 6 by Yuri Efremov (8450409)

“…A simulation showing the effect of anti-PCSK9 antibodies therapy. …”

Reduction of trained cFL models. by Melody K. Morris (115320)

“…Thus, a selection threshold of 5×10⁻⁴ to 7.6×10⁻³ results in the models at the “filter points” noted in (a).…”

Death-related down-regulated expression changes in WR99210-treated parasites. by Karthikeyan Ganesan (269200)

“…Twenty one genes showed a drug-dependent decrease in gene expression (see <a href="http://www.plospathogens.org/article/info:doi/10.1371/journal.ppat.1000214#ppat.1000214.s009" target="_blank">Table S5</a> for PlasmoDB gene number).…”

Bovine Milk Proteome in the First 9 Days: Protein Interactions in Maturation of the Immune and Digestive System of the Newborn by Lina Zhang (112887)

“…One third of the quantified proteins showed a significant decrease in concentration over the first 9 days after calving, especially in the immune proteins (as much as 40 fold). …”

Significant cholesterol genes arranged by day. by Katherine M. Peterson (19746455)

“…Each point represents a gene. The Fold Change plotted on the X-axis is the SFC. …”

mRNA levels in hypothalamus of rainbow trout incubated <i>in vitro</i> for 1 h at 15°C in modified Hanks’ medium containing 2 mM D-glucose alone (control) or containing 1, 10, or 1... by Marta Librán-Pérez (393255)

Relative levels of HSV-1 DNA in trigeminal ganglia during latency. by Jane E. Schrimpf (211203)