N-back learning effects. by Ana María Triana (19819446)

“…Pilot II data can be found in the Zenodo release [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002797#pbio.3002797.ref174" target="_blank">174</a>].…”

DataSheet_1_Culture density influences the functional phenotype of human macrophages.docx by Adele V. Ruder (14771188)

“…For THP-1 MΦ, the functional profile displayed a consistent trajectory with increasing density when exceeding a threshold (of 0.2 x 10³ cells/mm²), as visualized by principal component analysis. …”

The model of nondegradable inhibitor (multiple regulators). by Xiangrui Ji (16705908)

“…<p>(A) Given a fixed <i>θ</i>, <i>V</i>_<i>b</i> increases after deleting one activator and decreases after deleting one inhibitor. …”

Signal-to-noise ratio (SNR) of cortical neurons recorded from all animals across distinct survival times. by Marco Aurelio M. Freire (197478)

“…Temporal variation of the neuronal number in each group during its time of implant, comparing the first and the last week of array implantation in all survival times, in relationship to Threshold rate (Hz) adopted to assess SNR (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0130354#sec002" target="_blank">Material and Methods</a>). …”

Mean baseline BOLD responses to whisker stimulation and their changes at 2 and 5 weeks after the stepwise BCCAo in the saline-treated group. by Gabriella Nyitrai (370339)

“…The coordinates of the horizontal slices are presented next to the color bar on a sagittal view in relation to bregma. The statistical images were overlaid on an in-house standard template [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0198265#pone.0198265.ref058" target="_blank">58</a>].…”

Fig 4 - by Tal T. Robin (17847380)

“…<p><b>Different realities: Simulations using 4 parameter combinations that reside on the ridge of equal likelihood described in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0290821#pone.0290821.g003" target="_blank">Fig 3</a>: Blue—<i>β</i> = 0.029, <i>γ</i> = 0.03; orange—<i>β =</i> 0.02, <i>γ</i> = 0.04; green—<i>β =</i> 0.01, <i>γ</i> = 0.05; red—<i>β</i> = 10</b>^<b>−3</b><b>, <i>γ</i> = 0.06; For each parameter combination simulation was repeated 300 times.…”

Effect of glycerol accumulation on protein misfolding. by Kristopher Burkewitz (328137)

“…Increased temperature causes protein misfolding and decreased survival <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0034153#pone.0034153-Gidalevitz1" target="_blank">[24]</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0034153#pone.0034153-Hartl1" target="_blank">[25]</a>. …”

Compensatory evolution at TSS-distal sequences. by Ephraim Kenigsberg (234366)

“…</b> Shown are average G+C contents in the extant <i>S. cerevisiae</i> genome and in the inferred common ancestor of <i>S. cerevisiae</i> and <i>S. paradoxus</i>, depicted for 10 levels of nucleosome occupancy (<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1001039#s4" target="_blank">Methods</a>). …”

Presentation 1_Effects of temperature, pressure, and hydration on the microstructural characteristics and mechanical properties of calcite.pdf by Xiaoyi Zhou (8603268)

“…When the pressure increases from 0.1 GPa to 0.5 GPa, the volume of calcite crystal decreases by 1.10%, while the bulk modulus, shear modulus and Young’s modulus increase by 2.74%, 9.36% and 8.66%, respectively. …”

Biological relevance of Pβ: heights of Pβ peaks correlate with dominant-negative inhibition of ΔPrP-series mutants. by Yuzuru Taguchi (427652)

“…<p><b>A</b>. (<b>Left panel</b>) Schematic illustration of mutant PrP with deletions in the region between H1 and H2 (ΔPrP-series); (<b>right panel</b>), graph showing the PrP^Sc levels of convertible PrP coexisting with the indicated non-convertible ΔPrP mutant on 22L-infected N2a cells (adapted from reference [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0171974#pone.0171974.ref013" target="_blank">13</a>]). …”

Image1_Potential of Novel Methyl Jasmonate Analogs as Anticancer Agents to Metabolically Target HK-2 Activity in Glioblastoma Cells.tif by Damla Uludağ (12588412)

“…Considering that possibly decreased intracellular ATP levels by C-10 mediated inhibition of HK-2 activity and disabled VDAC interaction, a more detailed analysis of HK-2 inhibition–mediated cell death can provide a deep understanding of the mechanism of action on the oncosis/necroptosis axis. …”

Early RPMs increase the range without increasing the average speed of chromosome movement. by Chih-Ying Lee (162089)

“…By this measure, RPMs in <i>mps3-dCC</i> are not significantly different from wild-type at t₃ (*) while RPMs are significantly decreased in <i>mps3-dAR</i> and <i>csm4Δ</i>. Statistical analysis is in the legend to <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1002730#pgen-1002730-t001" target="_blank">Table 1</a>. …”

Acute exposure to dopaminergic neurotoxicants attenuates the propagation of intercellular Ca²⁺ waves in primary astrocytes. by Karin M. Streifel (653838)

“…(d,e) The mean intensity of intracellular Ca²⁺ responses in the cells acutely exposed to 100 µM MPP+ and 6-OHDA are significantly decreased compared to control. The vertical bar in (d) denotes 1 relative fluorescent unit; the horizontal bar denotes 10 sec. …”

Core of the method. by Kanaka Rajan (481577)

“…The stimuli are natural image clips which are pixel patches resized from a natural image database, as described in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0071959#pone.0071959-Tkaik1" target="_blank">[36]</a>. spikes are generated with a probability per time bin of from the model neuron by a thresholding the term, where the matrix is the receptive field of the neuron. …”

Anti-inflammatory and antinociceptive effects of the isatin derivative (Z)-2-(5-chloro-2-oxoindolin-3-ylidene)-N-phenyl-hydrazinecarbothioamide in mice by L.L.S.F.R. Dantas (10461438)

“…The number of abdominal writhings decreased with the increasing dose, but only 5.0 mg/kg COPHCT exhibited a significant response, with a reduction of 24.88%. …”

Effect of microglia depletion on cell viability in the retinal explants. by Rosa M. Ferrer-Martín (623505)

“…<p><b>A</b>: The distribution of microglial cells, revealed by CD11b immunolabeling, in explants treated with liposomes loaded with PBS (LIP-PBS) is similar to that in control explants (compare with Figs <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0135238#pone.0135238.g002" target="_blank">2A</a> and <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0135238#pone.0135238.g006" target="_blank">6A</a>). …”

Here, we present results from our block copolymer model, which simulates the chromosomes of the <i>Drosophila</i> genome. by Gaurav Bajpai (3704704)

“…<p>We represent the chromosomes as chains with two types of beads, each with different attraction strengths corresponding to euchromatic (relatively weak attraction) and heterochromatic (relatively strong attraction) regions. (a) The distribution of euchromatic and heterochromatic regions along each chromosome is based on experimental data from [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1011142#pcbi.1011142.ref093" target="_blank">93</a>]. …”

Heat map of chromatin interactions and isochores map of mouse chromosome 17. by Kamel Jabbari (582793)

“…<p>(A). The heat map of chromatin interactions in mouse chromosome 17 (from [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0168023#pone.0168023.ref008" target="_blank">8</a>]) is compared with the corresponding compositional profile (drawn from mm 10 genome assembly using a sliding window of 300 Kb and the program of [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0168023#pone.0168023.ref024" target="_blank">24</a>]). …”

In vivo migration of breast cancer cells within the liver sinusoids. by Claudia Wendel (187927)

“…Relative migration rates were based on the number of arrested cells and were calculated as described <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0030046#pone.0030046-Sahai1" target="_blank">[26]</a>.…”

Levels of FUS alter AR transcriptional activity. by Simon Haile (208081)

“…<p>(<b>A</b>) Depletion of FUS correlates with decreased AR activity. …”