No change in total cAMP during phagocytosis. by Megan N. Ballinger (359878)

“…A. Measurements of unfed macrophages showed small decreases in FRET, indicating selective photobleaching of mCit. …”

CD8 transport assay. by Yanzhuang Wang (87532)

“…The recruitment of the antibody onto the cell surface was analyzed by time-lapse microscopy in 2 min intervals over 70 min (Supplemental <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0001647#pone.0001647.s001" target="_blank">Movie S1</a>). …”

Differences in the susceptibility to ALV-J among embryo fibroblasts from inbred chicken lines. by Markéta Reinišová (3178911)

“…MOIs of 0.1 (A) and 10 (B) are shown. The data represent a typical experiment done in one parallel for each inbred line and each time.…”

Schematic of study design and regional DNA methylation changes and recovery. by Patrick J. Murphy (179847)

“…<p><b>A)</b> Male mice were assigned to CS- exposed or non-exposed groups (n = 10–12 per group). …”

Sensitivity of TM-NGS for mutation assessment in fresh-frozen and formalin-fixed paraffin embedded samples. by Andrea Mafficini (418974)

“…<p><b>A</b>) DNA from AVC1 cell line and a commercial germline DNA were mixed to obtain samples with a decreasing relative AVC1 DNA content (50%, 25%, 20%, 15%, 10%, 7.5%, 5%, 2.5%, 1% and 0%) to test TM-NGS sensitivity on DNA from frozen tissues. …”

Comparative analysis on DMS and EE data. by Luca Sesta (17996281)

“…On the y-axis, the <i>positive predicted value</i> is reported as a function of the first <i>L</i> residue pairs, sorted in decreasing order of the Frobenius norm (see Section A in the <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1011812#pcbi.1011812.s001" target="_blank">S1 Text</a>). …”

Intrinsic noise changes average patterning time along the tissue. by Ruben Perez-Carrasco (1749952)

“…Stochastic parameters are <i>ν</i>_<i>A</i> = <i>ν</i>_<i>B</i> = 1 and Ω = 100, the rest of parameters are those of <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1005154#pcbi.1005154.g002" target="_blank">Fig 2</a>. …”

Calibration of the in vitro assay for OR activation by tears. by Shani Agron (17691632)

“…<p>We monitored Renilla luciferase luminescence produced by cells (see <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002442#sec007" target="_blank">Methods</a>) transfected with the empty vector negative control (pCI), testing a wide range of stimuli concentrations, tears in blue and trickled saline in red. …”

BG model validation. by Mohammad Daneshzand (5993489)

“…From healthy to PD, the STN and GPi firing rates were increased, while the Th and GPe firing rates were decreased. These changes were much compatible with actual recordings [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0207761#pone.0207761.ref062" target="_blank">62</a>] compared to previously proposed BG models [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0207761#pone.0207761.ref060" target="_blank">60</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0207761#pone.0207761.ref063" target="_blank">63</a>].…”

Mato Grosso regional case study and Conceptual Diagram for VMR ecosystem services. by Patrick W. Keys (2575963)

“…The temporal dynamics of VMR precipitation (d), depicting average, monthly variation between the current (blue) and desert (red) vegetation scenarios are shown alongside the seasonal overlap of important sectors affected by precipitation including the growing season for rainfed maize [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0151993#pone.0151993.ref036" target="_blank">36</a>], reservoir filling [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0151993#pone.0151993.ref037" target="_blank">37</a>], and seasonal rangeland grazing, with the hashed area indicating decreased quality, wintertime forage [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0151993#pone.0151993.ref038" target="_blank">38</a>]. …”

γH2AX distribution in <i>T. californicum</i> meiocytes and spermatids. by Zoé Dumas (220877)

“…The position of the X chromosome is indicated with arrowheads or dashed circles in pachytene (see materials and methods for X vs autosome identification). Scale bar: 10 μm. See Fig A in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1011827#pgen.1011827.s001" target="_blank">S1 Text</a> for screens in males of other <i>Timema</i> species.…”

NanoString Data. by Dhammika H. M. L. P. Navarathna (122411)

“…<p>This Excel file contains the complete raw and processed data supporting Tables <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0128220#pone.0128220.t002" target="_blank">2</a> and <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0128220#pone.0128220.t003" target="_blank">3</a>. …”

Cellular factors induced in VZV-infected DRG include antiviral and pro-inflammatory cytokines. by Leigh Zerboni (231077)

“…The complete dataset is shown in <a href="http://www.plospathogens.org/article/info:doi/10.1371/journal.ppat.1004989#ppat.1004989.s001" target="_blank">S1</a> and <a href="http://www.plospathogens.org/article/info:doi/10.1371/journal.ppat.1004989#ppat.1004989.s002" target="_blank">S2</a> Figs.…”

Altered proteins upon mycolactone treatment. by José B. Gama (296675)

“…<p>Figure shows the proteins identified for each spot (numbers according to <a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0003066#pntd-0003066-g003" target="_blank">figure 3</a> and <a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0003066#pntd.0003066.s001" target="_blank">figure S1</a>) clustered into five categories. (1) Expression levels show decreased (red), increased (green) or no changes (black) in spot intensities upon mycolactone treatment. (2) MS and MS/MS parameters are presented, including the number of specific matched peptides (P), the sequence coverage (SC) in percentage, as well as the MS scores. …”

Plasma Levels of sVEGFR-3 of Microfilaremic Patients before and 12 Mo after Doxycycline Treatment by Alexander Yaw Debrah (65639)

“…The sVEGFR-3 levels decreased significantly at 12 mo (preceding supratesticular lymphatic dilation, see <a href="http://www.plospathogens.org/article/info:doi/10.1371/journal.ppat.0020092#ppat-0020092-t002" target="_blank">Table 2</a>) in the doxycycline-treated patients (<i>p</i> = 0.0125) to a level close to that of endemic controls whereas there was no difference in the placebo group (paired <i>t</i>-test).…”

Motifs identified from MEME analysis of Ash1 peaks. by Emily J. Parnell (6803422)

“…Combined mutation of all positions in this region of the <i>HO</i> promoter (underlined) only modestly decreased Ash1 binding (<a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1009133#pgen.1009133.s002" target="_blank">S2 Appendix</a>).…”

(CASE1) cellular oxygen distribution over time. by Xiao Fu (74654)

“…The distribution of oxygen tension within all cells exhibited an essentially unimodal shape under the normal condition (normal-red bars) where most cells had oxygen tensions of 10 to 25 mmHg, a small portion of cells located near vessels had higher levels ranging from 35 to 40 mmHg and no cells had an oxygen tension less than 4 mmHg O₂. …”

Novel siRNA formulation to effectively knockdown mutant p53 in osteosarcoma by Anup K. Kundu (4164571)

“…Among all lipid-polymer nanoformulations, nanoparticles with 10% PLGA showed highest mutant p53 knockdown efficiency while maintaining higher cell viability when a nanoparticle to siRNA ratio equal to 6.8:0.66 and 75 nM siRNA was used. …”

Pathway gene chip analysis after PBRM1 inhibition. by HongKai Wang (4395157)

“…<p>(A) Gene expression profiling using the Affymetrix Human Gene 1.0 ST platform identified 872 transcripts that were significantly differentially expressed(<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0180862#pone.0180862.s001" target="_blank">S1 File</a>). …”

Changes in Cell Cycle genes due to ethanol. by Maria Camargo Moreno (4258951)

“…Several of the genes that were increased in WT mice after ethanol were decreased in p53 KO, and vice versa. Same convention as <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0180873#pone.0180873.g003" target="_blank">Fig 3</a>.…”