Sub-division of psoriasis lesions into strong, moderate and weak inflammatory groups based on genome-wide expression profiles. by William R. Swindell (175427)

“…Lesional (PP) and non-lesional (PN) skin from each subject was analyzed by microarray to identify PP-increased and PP-decreased transcripts. Chart colors denote the behavior of 1000 “signature transcripts” associated with each cell population (see scale and <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0034594#s4" target="_blank">Methods</a>). …”

Shape features of discoid compartments with homogeneous membrane. by Jure Derganc (195252)

HLA Associations in Classical Hodgkin Lymphoma: EBV Status Matters by Xin Huang (11077)

“…The allele frequency of HLA-A2 was significantly decreased in the EBV+ cHL population. …”

Identification of differential proteins in cassava cultivar NZ199 leaves from autotetraploid and diploid genotypes. by Feifei An (551090)

“…Protein spots whose abundance increased (+) or decreased (−) after polyploidy were shown. The numbers corresponded to the 2-DE gel in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0085991#pone-0085991-g002" target="_blank">Fig. 2</a>.…”

The utero-placental pump. by Neele S. Dellschaft (8905004)

“…(C) Time course of contractions in the same participants, with each line representing the change (%) of the wall not covered by placenta (increased during contraction) and the area of the uterine wall covered by placenta (decreased during contraction). Underlying data plotted in panels B and C are provided in <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3000676#pbio.3000676.s012" target="_blank">S1 Data</a>. …”

Deletion of RSEL sequence affects secretion and intracellular localisation of DmManf. by Riitta Lindström (453311)

“…DmManf protein levels in cell lysates and conditioned medium were estimated according to <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0073928#pone.0073928.s001" target="_blank">Figure S1G</a>. …”

Average cell length affects nematic ordering in open-walled microfluidic trap simulations. by James J. Winkle (7181861)

“…For each simulation snapshot the order parameter <i>q</i> (<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1009381#pcbi.1009381.e004" target="_blank">Eq (1)</a>) was measured in two different trap regions once the population reached steady-state. …”

Comparison of 86-24 (WT) and the qseC mutant under different growth conditions. by David T. Hughes (250505)

Pathovar distribution under different growth conditions. by David T. Hughes (250505)

DataSheet1_Multifunctional lignin-poly (lactic acid) biocomposites for packaging applications.PDF by Esakkiammal Sudha Esakkimuthu (5136842)

“…Low lignin contents between 1 and 10% generally had a favorable impact on mechanical strength and moduli as well as functional properties of the PLA-based composites. …”

Longitudinal Changes in Sex Hormone Binding Globulin (SHBG) and Risk of Incident Diabetes: The Study of Women's Health Across the Nation (SWAN) by Monique M. Hedderson (17761480)

“…</p><p dir="ltr"><u>Conclusion</u>: Increasing levels of SHBG over the menopause transition were associated with a decreased risk of incident diabetes. Stable to increasing rates of change in SHBG were also independently associated with decreased risk of diabetes compared to decreasing rates of change, suggesting SHBG may affect glucose through a mechanism beyond androgenicity.…”

SPRAY RETENTION ON COFFEE LEAVES ASSOCIATED WITH TYPE AND CONCENTRATION OF ADJUVANTS by José E. da C. R. Cação (7823564)

“…Spray retention on adaxial and abaxial coffee leaf surfaces was performed using a micro-sprayer at solution concentrations of 0, 0.01, 0.1, 0.5, and 1.0% v v−1. …”

LNCaP cell lines expressing Abi1 isoforms exhibit different spreading and morphological phenotypes. by Patrycja M. Dubielecka (249192)

“…<p><b>A. Isoform 2 expressing cell lines exhibit decreased spreading activity.…”

GO enrichment analysis of differentially expressed genes in the <i>rpmJ</i> mutant. by Riko Shirakawa (13040376)

“…<p>GO enrichment analysis was performed using differentially expressed genes in the <i>rpmJ</i> mutant (195 upregulated genes, 275 downregulated genes) (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0277162#pone.0277162.s001" target="_blank">S1 Table</a>). …”

Notch activation drives apical constriction and epithelial fold. by Hui-Yu Ku (3185502)

“…The three types of cells (decreasing, fluctuating and constant, see <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1006898#pgen.1006898.g003" target="_blank">Fig 3B and 3C</a>) are color-coded. …”

RL agent simulations for slowly-changing perceptual biases. by Yelin Dong (21396067)

“…Source data for <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002764#pbio.3002764.s005" target="_blank">S5 Fig</a>A–<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002764#pbio.3002764.s005" target="_blank">S5 Fig</a>H are available in “simulation_data/FigureS5.mat” at <a href="https://doi.org/10.5281/zenodo.15341390" target="_blank">https://doi.org/10.5281/zenodo.15341390</a>.…”

Performance of various alignment methods and similarity measures in identifying common homologs and/or DS-related homologs. by Chia-Han Chu (124931)

“…TM-align <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0013361#pone.0013361-Zhang1" target="_blank">[31]</a>, CE <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0013361#pone.0013361-Shindyalov1" target="_blank">[33]</a> and FAST <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0013361#pone.0013361-Zhu1" target="_blank">[30]</a> are order-dependent structural alignment methods. …”

The equilibrium theory developed here accurately predicts how and when membrane localization will enhance protein interaction strength. by Osman N. Yogurtcu (4911409)

“…<p>(a) Our theory (<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1006031#pcbi.1006031.e006" target="_blank">Eq 3</a>) shown in solid black lines in all panels, is compared with ODE simulation results shown in red circles. …”

Network structure through time. by Hamish Gibbs (9548952)

“…<p>All network connections in a) the period preceding the first national lockdown (March 10 to March 22, 2020) and b) following the first national lockdown (March 23 to April 4, 2020). …”

HRCT patterns and histology findings. by Konstantinos Samitas (2938953)

“…<p>(A) Patient 1: HRCT (pulmonary window) demonstrating diffuse ground glass opacities, small ill-defined centrilobular nodules, lobular areas of decreased attenuation (mosaic pattern) with a histological pattern consistent with hypersensitivity pneumonitis demonstrating poorly formed non-necrotizing granulomas (x20 and 40 respectively) and a definite diagnosis after MDT review of hypersensitivity pneumonitis. …”