Lab 3: Biol2050 Abundance and Diversity in Insects Data Set 1 by Katrin Chapkis (797943)

“…When the wind speed was found in the Beaufort scale, it was given a Beaufort number of 5, which corresponded to Fresh Breeze in Seaman's term.…”

Use of 2-Aminopurine Fluorescence To Examine Conformational Changes during Nucleotide Incorporation by DNA Polymerase I (Klenow Fragment)^† by Vandana Purohit (2947848)

“…Finally, when the primer had a 3‘-OH, a fluorescence decrease with a rate equal to the rate of nucleotide incorporation was observed with both 0 and +1 position reporters. …”

Use of 2-Aminopurine Fluorescence To Examine Conformational Changes during Nucleotide Incorporation by DNA Polymerase I (Klenow Fragment)^† by Vandana Purohit (2947848)

“…Finally, when the primer had a 3‘-OH, a fluorescence decrease with a rate equal to the rate of nucleotide incorporation was observed with both 0 and +1 position reporters. …”

Table_2_Characteristics of steroid hormones in systemic lupus erythematosus revealed by GC/MS-based metabolic profiling.docx by Dehong Wu (2236318)

“…Principle component analysis demonstrated that the steroid profile was obviously distinguished between patients with SLE and controls. A lower level of total androgens was observed in patients, and nine androgens [dehydroepiandrosterone (DHEA), testosterone, Etio, androsterone, βαβ-Diol, Epi-An, Epi-DHT, 16α-OH-DHEA, and A-Diol] underwent significant decrease. …”

Mechanical Properties of Water-Assembled Graphene Oxide Langmuir Monolayers: Guiding Controlled Transfer by Katharine L. Harrison (1532038)

SPARC effect on ECM proteins in differentiating myoblasts. by Aicha Melouane (4530787)

“…A decrease of fibronectin expression with rSPARC and an increase after anti-SPARC were observed. …”

Scaling of Soaring Seabirds and Implications for Flight Abilities of Giant Pterosaurs by Katsufumi Sato (115898)

“…In comparisons of the power available from muscle and the mechanical power required to fly, it is predicted that the margin between the powers should decrease with body size and that flying animals have a maximum body size. …”

Differentially expressed genes by the risk alleles at 29 Mb and 33 Mb play important role in T-cell immunity. by Noriko Tonomura (227263)

“…<p>A. The risk allele at the 29 Mb at homozygous state has a clear cis-regulation effect on the expression levels of <i>TRPC6</i>, <i>KIAA1377</i>, and <i>ANGPTL5</i>, three of the most proximal genes. …”

<i>fstr-1/2</i> RNAi inhibits expression of <i>clk-1</i> retrograde-response genes. by David Cristina (265223)

“…With the exception of <i>gpd-2</i>, all genes showed a significant decrease in expression (<i>p</i><0.05) in the presence of <i>fstr-1/2</i> RNAi. …”

Association analysis given linkage. by Rohina Rubicz (104167)

“…When using the combined sample of both studies (SAFHS+SAFDGS), all SNPs originally significant in the SAFHS discovery sample are highly significant.</p>a<p>Since we used a liability threshold model for analysis of the dichotomous trait (see <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1003147#s4" target="_blank">methods</a> section), the direction of effect on EBNA-1 discrete serostatus is opposite of the sign of the regression coefficient, but is in the same direction as the regression coefficient for the quantitative trait (e.g. for SNP rs204999, the minor allele is associated with a decrease in EBNA-1 antibody level and seronegativity).…”

Supplemental Figure 16 by Jill Hikspoors (11718656)

“…<div><b>article 'A pictorial account of the human embryonic heart between 3.5 and 8 weeks of development'</b></div><div><b><br></b></div><i>Supplemental Figure 16. …”

VPA and NAM treatment modulates H3K27 acetylation at the promoters of myeloid specific genes. by Marije Bartels (532852)

“…At day 4 of differentiation, cells were treated overnight with 200μM, or 5mM NAM. Next, lysates were prepared, followed by ChIP-sequencing (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0196400#sec002" target="_blank">Methods</a>). …”

Training at maximal power in resisted sprinting: Optimal load determination methodology and pilot results in team sport athletes - Fig 2 by Matt R. Cross (5089268)

“…Note that <i>L</i>_opt is produced at optimal velocity <i>v</i>_opt = 0.5<i>v</i>₀ [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0195477#pone.0195477.ref014" target="_blank">14</a>], data described in <b><a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0195477#pone.0195477.g001" target="_blank">Fig 1</a></b>.…”

Table_1_Molecular characterization of cross-kingdom RNA interference in Botrytis cinerea by tomato small RNAs.xlsx by Si Qin (3627863)

“…In order to study the functionality of this plant sRNA in reducing the Bcspl1 transcript level, we generated a fungal mutant that contained a 5-nucleotide substitution that would abolish the interaction between the transcript and the sRNA without changing the encoded protein sequence. …”

Altered Cerebrospinal Fluid Proteins in Smith–Lemli–Opitz Syndrome by Wenping Li (440398)

Mechanical Properties of Water-Assembled Graphene Oxide Langmuir Monolayers: Guiding Controlled Transfer by Katharine L. Harrison (1532038)

Altered Cerebrospinal Fluid Proteins in Smith–Lemli–Opitz Syndrome by Wenping Li (440398)

Rapid and Localized Mechanical Stimulation and Adhesion Assay: TRPM7 Involvement in Calcium Signaling and Cell Adhesion by Wagner Shin Nishitani (198823)

“…TRPM7 inhibition by siRNA on HUVECs caused an increase in adhesion relative to control (no siRNA treatment) and non-targeting siRNA, but a decrease to 80% of calcium response relative to non-targeting siRNA which confirms the important role of TRPM7 in mechanotransduction despite the increase in adhesion.…”

Selective Enrichment of Cysteine-Containing Phosphopeptides for Subphosphoproteome Analysis by Mingming Dong (1471396)

“…Interestingly, amino acid residues surrounding the identified phosphosites were enriched with buried residues (L, V, A, C) while depleted with exposed residues (D, E, R, K). …”

DataSheet_1_Molecular characterization of cross-kingdom RNA interference in Botrytis cinerea by tomato small RNAs.xlsx by Si Qin (3627863)

“…In order to study the functionality of this plant sRNA in reducing the Bcspl1 transcript level, we generated a fungal mutant that contained a 5-nucleotide substitution that would abolish the interaction between the transcript and the sRNA without changing the encoded protein sequence. …”