Computational performance analysis of the integrated network to predict functional relationships and the relative performance of different datasets. by Yuanfang Guan (51049)

“…<p>(A) Five-fold cross-validation of the integrated results applied to predict gold standard pairs defined by co-annotation to specific GO terms. …”

Assessment of ¹³¹I radiouptake of GLV-1h153-infected PANC-1 cells in culture. by Dana Haddad (310869)

“…PCCL3 was used as a positive control. Radiouptake was time-dependent with a maximal uptake of over 70 fold as compared to control at 24 hrs after infection. …”

Bacteria with significantly changed abundance in stools of <i>Pglyrp</i>-deficient mice. by Roman Dziarski (204894)

“…<p>Heatmap representation of the fold increase (red) or decrease (green) in the abundance of the indicated bacterial taxons, calculated as a ratio: % abundance in <i>Pglyrp</i>-deficient mice / % abundance in WT mice. …”

The expression of PGC-1α and mitochondrial alteration in Myc-ON mice. by Hyoung-gon Lee (73934)

“…Morphometric analysis demonstrated about 2.5 fold increase of mitochondria number and about 30% decrease of mitochondrial size in the cardiomyocytes of Myc-ON mice (p<0.05) compared with Myc-OFF mice (F). n: nucleus, m: myofibrils, mito: mitochondria. …”

NUP-1 is necessary for cell growth and maintenance of nuclear architecture. by Kelly N. DuBois (176072)

“…<p>NUP-1 RNAi was induced in both BSF and PCF cells. (A, B) NUP-1 mRNA was depleted by ∼30% as measured by qRT-PCR normalized to β-tubulin, corresponding to a ∼75% decrease in NUP-1 protein after 24 h of RNAi induction. …”

The time-dependent currents in <i>Mytilus galloprovincialis</i> hemocytes are modulated by the osmotic pressure. by Monica Bregante (3391766)

“…The arrow emerging from each trace points to the correspondent data point in B). D) The hyperosmotic bath solution determines a decrease of the steady-state current elicited by V = -100 mV (left bar) without altering the capacitance of the cells (right bar). …”

Understanding the impact of the cofactor swapping of isocitrate dehydrogenase over the growth phenotype of <i>Escherichia coli</i> on acetate by using constraint-based modeling by Erick Armingol (5125595)

“…Together with an increased total ATP production, this scenario resulted in a 10-fold increment in the flux of ATP not used for growing purposes. …”

<i>Y. pseudotuberculosis</i> triggers NFκB activation independently of Nod1 and Nod2. by Victoria Auerbuch (69201)

“…Data shown is the average fold NFκB activation (over uninfected/untreated) ± sem from one independent, representative experiment and each experiment was repeated for a total of three (Nod1) to four (Rip2) replicates. * Statistically significant decrease in C12-iE-DAP-induced NFκB activation according to the student t-Test. …”

Activity of metalloproteinases in the adult gerbil hippocampus after global ischemia. by Luiza Wójcik-Stanaszek (347531)

“…Confocal photomicrographs showing <i>in situ</i> zymography in DG and CA1 from a control animal (A, E) and from ischemic animals sacrificed at 7 (B, F), 14 (C, G) and 28 days (D, H) after ischemia. …”

Effects of pipeline optimization on group-level activation, <i>strong</i> contrast. by Nathan W. Churchill (180963)

“…(C) between-subject Jaccard activation overlap, for voxels significant at FDR = 0.05. For (B–C), each point represents mean correlation/overlap of one subject with all others; blue lines show an increase in correlation/overlap with <b>IND</b>, and red lines show a decrease.…”

Effect of synergistic antimicrobial combinations on growth kinetics of MDR pathogens. by Amber Farooqui (315564)

“…Control organisms were grown in MH broth only. A 2Log₁₀ decrease at any time point from original CFU was considered as significant. …”

Data_Sheet_5_DNA Methylation Is Responsive to the Environment and Regulates the Expression of Biosynthetic Gene Clusters, Metabolite Production, and Virulence in Fusarium graminear... by Christopher Bonner (9990611)

“…In this study, we characterized two DNMTs (FgDIM-2 and FgRID) in F. graminearum, with homologies to “Deficient in methylation” (DIM-2) and “Repeat-induced point (RIP) deficient” (RID) from Neurospora. The loss of DNMTs resulted in not only a decrease in average methylation density in the nutrient-poor, compared to nutrient-rich conditions, but also differences in the genes expressed between the WT and the DNMT mutant strains, implicating the external environment as an important trigger in altering DNA methylation patterns. …”

Data_Sheet_2_DNA Methylation Is Responsive to the Environment and Regulates the Expression of Biosynthetic Gene Clusters, Metabolite Production, and Virulence in Fusarium graminear... by Christopher Bonner (9990611)

“…In this study, we characterized two DNMTs (FgDIM-2 and FgRID) in F. graminearum, with homologies to “Deficient in methylation” (DIM-2) and “Repeat-induced point (RIP) deficient” (RID) from Neurospora. The loss of DNMTs resulted in not only a decrease in average methylation density in the nutrient-poor, compared to nutrient-rich conditions, but also differences in the genes expressed between the WT and the DNMT mutant strains, implicating the external environment as an important trigger in altering DNA methylation patterns. …”

Storage volume and water level fluctuations change across seasons. by Philipp Emanuel Hirsch (676010)

“…Accordingly, if columns point below the zero isocline, they constitute a decrease in water level. …”

Data_Sheet_4_DNA Methylation Is Responsive to the Environment and Regulates the Expression of Biosynthetic Gene Clusters, Metabolite Production, and Virulence in Fusarium graminear... by Christopher Bonner (9990611)

“…In this study, we characterized two DNMTs (FgDIM-2 and FgRID) in F. graminearum, with homologies to “Deficient in methylation” (DIM-2) and “Repeat-induced point (RIP) deficient” (RID) from Neurospora. The loss of DNMTs resulted in not only a decrease in average methylation density in the nutrient-poor, compared to nutrient-rich conditions, but also differences in the genes expressed between the WT and the DNMT mutant strains, implicating the external environment as an important trigger in altering DNA methylation patterns. …”

Specialization of Gene Expression during Mouse Brain Development by Noa Liscovitch (108538)

“…Surprisingly, we found that during the time that the brain becomes anatomically regionalized in early development, transcription specialization actually decreases reaching a low, “neurotypic”, point around birth. …”

Donor mMSCs are not detectable long-term. by Claudia Lange (233575)

“…<p>(a) Tracking of eGFP-labeled clonal IXH8 donor mMSCs after transplantation revealed a fast decrease in PB. …”

Caspase 3 and CD62L expression is progressively lost as proliferation proceeds. by Scott McComb (234597)

“…(B) OVA specific CD8⁺ T cells were gated for division number based on CFSE dilution. Cells show a significant, coordinate decrease in the expression of active caspase-3 and CD62L/IL7Rα as cell proliferation proceeds (***P<0.005, *P<0.05, n = 3 per timepoint).…”

Data_Sheet_6_DNA Methylation Is Responsive to the Environment and Regulates the Expression of Biosynthetic Gene Clusters, Metabolite Production, and Virulence in Fusarium graminear... by Christopher Bonner (9990611)

“…In this study, we characterized two DNMTs (FgDIM-2 and FgRID) in F. graminearum, with homologies to “Deficient in methylation” (DIM-2) and “Repeat-induced point (RIP) deficient” (RID) from Neurospora. The loss of DNMTs resulted in not only a decrease in average methylation density in the nutrient-poor, compared to nutrient-rich conditions, but also differences in the genes expressed between the WT and the DNMT mutant strains, implicating the external environment as an important trigger in altering DNA methylation patterns. …”

Time course of microglial/macrophages phagocytic activity after ischemia: effect of 3-AB treatment. by Alexandre Madinier (368860)

“…Note the absence of staining at 4 h in vehicle (A1–2) and 3-AB treated animals (B1-2). Rats treated with 3-AB (D1–2) showed a decrease in ED-1 staining at 24 h as compared to vehicle treated animals (C1–2). …”