Simulation-Based Approach to Data Fusion for Three Different Measures of Caspase Activity by John G Albeck (268792)

“…(C) An increase in T_s to 100 min (D) or a decrease in <i>f</i> to 0.1.</p> <p>(E, F, G) Concordance of data on EC substrate cleavage as obtained from immunoblot, flow cytometry, and live-cell assays in HeLa cells treated with 250 ng/ml (E), 50 ng/ml (F), or 10 ng/ml (G) TRAIL. …”

Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation by Nagarjuna Nagaraj (1296663)

“…Reducing the target values from a standard of 30 000 to 5000 ions did not severely affect identification rates but did decrease identification and localization scores for phosphorylation sites. …”

Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation by Nagarjuna Nagaraj (1296663)

“…Reducing the target values from a standard of 30 000 to 5000 ions did not severely affect identification rates but did decrease identification and localization scores for phosphorylation sites. …”

Expression of STUB1DN mutants leads to the formation of protein aggregates. by Joao Vasco Ferreira (7499918)

“…Cells were further incubated in the presence or absence of 10uM of MG-132 and 50nM of BafA for 6h. A) Cell extracts of proteins insoluble in increasing concentrations of SDS where filtered through a nitrocellulose membrane and trapped proteins were blotted with antibodies directed against ubiquitin, p62 and myc tag. …”

Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation by Nagarjuna Nagaraj (1296663)

“…Reducing the target values from a standard of 30 000 to 5000 ions did not severely affect identification rates but did decrease identification and localization scores for phosphorylation sites. …”

Simultaneous PreCaT and extracellular field potential recordings. by Carmelo Sgobio (652457)

“…Effects of application of a cocktail of antagonists of ionotropic glutamate and GABA receptors ((2R)-amino-5-phosphonovaleric acid (APV, 50 µM); 2,3-dihydroxy-6-nitro-7-sulfamoyl-benzo[f]quinoxaline-2,3-dione (NBXQ, 10 µM)) are also shown. …”

Female motorcycle mortality in Brazilian municipalities, 2005, 2010 and 2015 by Pedro Cisalpino Pinheiro (6070499)

“…In the municipalities of the South and Southeast regions, mainly in the period between 2010 and 2015, there was an apparent decrease in mortality. The percentage variation showed a reduction in the indicator analyzed in the period between 2010 and 2015 for the largest municipalities in the South and Southeast regions. …”

Neutralization by PGT121-137 antibodies and chimeric variants. by Marie Pancera (335526)

“…<p>Strong neutralization is coded in red (>90%), intermediate in yellow (75–90%) and weak in green (50–75%). Neutralization data were generated in single neutralization experiments, with each test sample analyzed in duplicate to determine the percent decrease in virus growth (neutralization) as compared and normalized to the control wells without antibody expression (defined as 0% neutralization). …”

Functional measures correlated with acute saliva response miRNAs. by Daria LaRocca (6169973)

“…Also note that two of the cognitive measures (TMB_COG and TMB_Dual_COG) showed an apparent learning effect (improved performance across time, other than the immediate post-fight time point). A learning effect was also seen in 1 of the balance measures (TLEOFP), with decreased body sway evidence across time, other than the immediate post-fight time point.…”

Steady-state endocytosis and degradative trafficking of occludin. by Sarah J. Fletcher (665781)

“…Cell surface proteins were biotinylated and trafficking allowed to recommence for designated time-points in the presence of DMSO or BafA. Cell surface biotinylated proteins were reduced, thus only internalised proteins remain biotinylated. …”

Schematic of the filtration setup and flowmeter device used in this study. by Corentin Fournier (5088941)

“…<p>We used overpressure filtration for plankton size-class filtration with three filters in series, (<i>i</i>) a 180-μm nylon net pre-filter to remove zooplankton and larger particles, and (<i>ii</i>) a 5.0-μm and (<i>iii</i>) a 0.2-μm pore-size polycarbonate membrane filter, in order to collect the nanoplankton and picoplankton, respectively, for DNA extraction. …”

L2/3 pyramidal cell type composition and gene expression are selectively regulated during development. by Salwan Butrus (11682926)

“…<i>N</i> = 10–12 slices from 3 mice per time point (<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3003176#pbio.3003176.s010" target="_blank">S1 Data</a>).…”

zCFTR shows different responses to ATP and phosphate analogues. by Jingyao Zhang (241197)

“…<b>(C)</b> A real time recording of WT-zCFTR shows a slight decrease of the macroscopic current upon switching the ligand from 2 mM ATP to 50 μM P-ATP. …”

Data presented in the paper "Consumer and host body size effects on the removal of trematode cercariae by ambient communities" by J. (Jennifer) Welsh (9158432)

“…One individual was The effect of dilutor size on removal rates of cercariae was investigated in laboratory experiments by determining removal rates of five size categories of each dilutor species (Table 1). In addition, a sixth treatment without dilutors served as a control to account for potential loses of cercariae due other factors (knowing the number of added cercariae was 50) and to test for the presence of a dilution effect (control vs. dilutor size treatments). …”

Dynamic modeling of rapid calcium signaling in spines and dendrites. by L. Niels Cornelisse (67656)

“…Quantification of fluorescence step sizes (middle panel) and fluorescence decreases after APs (right panel) during the AP train calculated by the model cf <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0001073#pone-0001073-g002" target="_blank">Figure 2F</a>.…”

Self-organization of bacterial communities against environmental variations. by Sohei Tasaki (3808798)

“…The left center is the inoculation point. Initial nutrition level, 2.0 g l^-1 peptone (A-C). …”

MINK plays an essential role in EV71 viral protein synthesis. by Shi Yun Leong (699834)

“…<p>(A) EV71 viral RNA was transfected into RD cells pre-treated with MINK siRNA and supernatant was harvested from cells at 12h post-infection (hpi) for viral plaque assay. …”

Overexpression of Both <i>ERG11</i> and <i>ABC2</i> Genes Might Be Responsible for Itraconazole Resistance in Clinical Isolates of <i>Candida krusei</i> by Xiaoyuan He (787681)

“…</p><p>Results</p><p>We found 7-point mutations in <i>ERG11</i> gene of all the <i>C</i>.…”

Red Blood Cell Transfusion and Mortality in Trauma Patients: Risk-Stratified Analysis of an Observational Study by Pablo Perel (102217)

“…Transfusion was associated with an increase in all-cause mortality among patients with &lt;6% and 6%–20% predicted risk of death (odds ratio [OR] 5.40, 95% CI 4.08–7.13, <i>p&lt;</i>0.0001, and OR 2.31, 95% CI 1.96–2.73, <i>p&lt;</i>0.0001, respectively), but with a decrease in all-cause mortality in patients with &gt;50% predicted risk of death (OR 0.59, 95% CI 0.47–0.74, <i>p&lt;</i>0.0001). …”

Data_Sheet_1_Molybdenum and Cadmium Co-induce Mitochondrial Quality Control Disorder via FUNDC1-Mediated Mitophagy in Sheep Kidney.doc by Yunhui Wu (2995374)

“…Forty-eight 2-month-old sheep were stochastically divided into four groups, as shown below: control group, Mo [45 mg/kg body weight (BW)] group, Cd (1 mg/kg BW) group and Mo (45 mg/kg BW)+Cd (1 mg/kg BW) group, with 50 days feed technique. The results showed that Mo or/and Cd attract an unbalance of trace minerals and vacuoles and granular degeneration of renal tubular epithelial cells, and increase the number of mitophagosomes and vacuole-mitochondria and LC3 puncta and MDA and H₂O₂ contents, and decrease ATP content in the kidney. …”