Hierarchical clustering of ECM and growth factor genes. by Rekha Nair (127554)

“…Of the 84 extracellular matrix genes analyzed (A), approximately 34% of the genes demonstrated either an overall decrease (green) or increase (red) in gene expression relative to undifferentiated ESCs, whereas approximately 60% of the 84 growth factor genes (B) resulted in overall expression changes relative to ESCs. …”

S7 Fig - by Deanna Arsala (3557738)

Global correspondence of gene expression between human psoriasis and mouse psoriasiform phenotypes. by William R. Swindell (175427)

“…The Pearson correlation coefficient (<i>r</i>) calculated from each scatterplot is shown in the lower-right corner of (A) - (F). In panel (G), the human-mouse correspondence was evaluated with respect to a subset of 2617 transcripts elevated in human psoriasis and 3540 transcripts decreased in human psoriasis (FDR-adjusted P<0.05, log₂-transformed fold-change estimate greater than 0.50 in absolute value). …”

Effects of 1 and 16 hr of AICAR incubation on p53 phosphorylation in keratinocytes, MEFs and other cells. by Yasuo Ido (172159)

“…<p><b>a.</b> Primary keratinocytes were incubated with 1 mM AICAR or 50 µM H₂O₂ (positive control) for 1 hr. …”

Intermittent fasting enhances long-term memory consolidation, adult hippocampal neurogenesis and expression of longevity gene Klotho (Microarray dataset) by Sandrine Thuret (10326662)

“…Relatively loose criteria were initially used to filter the data (to minimize analytical false negatives), but genes were required to pass these criteria for each of the four methods to be considered further (four out of four methods) to minimize analytical false positives. </p> <p>A fold change of 1.2 along with a t-test p-value of less than 0.05 was used in RMA and dChip, and a confidence of 50% or higher was used in the Drop Method. …”

Changes of transcripts for JA metabolism at 6 h after gravistimulation. by Liwei Hu (454586)

“…Squares arranged in rows and columns represent individual transcripts at a single time point in the process. An individual square in a given area has the same color as the guide bar in the same column. …”

Improved positional acuity with video-game experience. by Roger W. Li (167488)

“…SB2: TvN function shifts downward (increase in efficiency). SA5: The knee point of TvN function shifts downward and to the left (decrease in internal noise). …”

Impact of AID on target gene expression. by Maria Schubert (422035)

“…The dashed lines show 3-fold increase or decrease in expression. M = IGHV mutated; UM = IGHV unmutated. …”

Fecal 16S V4 rRNA differential abundance testing in dogs with and without chronic gastrointestinal disease. by Caylie D. Voudren (18928380)

“…<p>Panel <b>(A)</b> represents the log fold changes in OTU differential abundances identified by 16S V4 rRNA genomic sequencing as significantly different between 16 dogs with untreated chronic enteropathy and 16 healthy controls. …”

Gene expression in primary human skeletal muscle cells after treatment with acylcarnitines. by Rainer Lehmann (141280)

“…Values are shown as fold changes compared with untreated (L-C, AC) or BSA-treated (p, p+AC) control cells, shown are means ± SEM; * significant increase with p<0.05 vs. control cells, † p = 0.06 vs. control cells; # significant decrease with p<0.05 vs. control cells. …”

Translational control in the long-lived ER secretory pathway mutants. by Vyacheslav M. Labunskyy (505446)

“…<p>(<b>A</b>) Changes in protein translation in <i>alg12Δ</i>, <i>bst1Δ</i>, and wild-type cells treated with tunicamycin (TM) relative to untreated wild-type cells are shown in log₂ scale for all genes that are activated or repressed more than 1.5-fold in at least one of the strains. …”

Cellular stress response-associated RNA changes and inferred signaling pathways. by Renée Deehan (326438)

“…<p>(<b>A</b>) Biologic processes associated with the cellular stress response inferred to increase or decrease upon treatment with aleglitazar, tesaglitazar or Pio/Feno. …”

Dynamics of attractors during loss and recovery of response for the population studied. by Sarah L. Eagleman (7586465)

“…<p>A) The average ellipse radius ratio (ERR) for all patients appears to decrease gradually as patients approach loss of response (LOR), and continues to decrease in value as anesthetic depth increases (A, left). …”

Timed data for onset and survival. by Alexandre Henriques (359791)

“…(A) Onset of weight decrease was defined as a drop of 5% of the mouse maximal weight. …”

Assessment of biomarker stability and reproducibility. by Jochen Neuhaus (152170)

“…Coefficients of variations were calculated by dividing standard deviations by the observed overall range of SVM scores [highlighted in grey, 21PP from –1.50 to +1.50 (3.0 a.u.), 5PP from 4.50 to +3.0 (7.5 a.u.), and 11PP from –1.50 to +1.50 (3.0 a.u.)]. …”

Image1_Arum palaestinum delays hepatocellular carcinoma proliferation through the PI3K-AKT-mTOR signaling pathway and exhibits anticoagulant effects with antimicrobial properties.j... by Majdi Dwikat (16002338)

“…The aqueous extract of AP 1) reduced secretions of HCC αFP by 1.55-fold and 3.3-fold at the 50 and 100 μg/mL concentrations, respectively (p = 0.0008); 2) decreased phosphorylation in the PI3K-AKT-mTOR signaling pathway (p < 0.05); and 3) shifted cells from necrosis to apoptosis by 50% and 70% at the 50 and 100 μg/mL concentrations, respectively (p < 0.05).…”

The top 20 ranked genes that are differentially expressed upon yoga (SK&P) or the control regimen. by Su Qu (169630)

“…Values greater than 1.0 denote an increase and values smaller than –1.0 indicate a decrease in gene expression.</p>…”

Postfabrication Annealing Effects on Insulator–Metal Transitions in VO₂ Thin-Film Devices by Servin Rathi (1552414)

“…It is found that the sheet resistance and the insulator–metal transition point, induced by both voltage and thermal, decrease when the devices are annealed from 200 to 500 °C. …”

Postfabrication Annealing Effects on Insulator–Metal Transitions in VO₂ Thin-Film Devices by Servin Rathi (1552414)

“…It is found that the sheet resistance and the insulator–metal transition point, induced by both voltage and thermal, decrease when the devices are annealed from 200 to 500 °C. …”

Organ level model. by Shayoni Ray (179927)

“…<p>An organ-level simulation containing three ideally localized clefts is shown at (a) 0 MCS and (b) 1500 MCS (Scale = 50 µm). The results were quantified with (c) cleft depth and (d) spanning angle. …”