Table S1 - Regulation of Gene Expression in Hepatic Cells by the Mammalian Target of Rapamycin (mTOR) by Rosa H. Jimenez (253441)

“…The magnitude of rapamycin effect is given as log-base 2 of the fold-change.</p> <p>(0.25 MB DOC)</p>…”

Results of the performed sensitivity analysis for fluticasone propionate. by Niklas Hartung (4002266)

“…<p>For each of three different exposure measures readouts (AUC, <i>C</i>₂₄, and lung selectivity), the impact of a 2-fold increase (blue) and decrease (red) are depicted for the formulation parameter particle size (top bar) and a set of physiological (middle bars) and drug-dependent parameters (bottom bars). …”

Peritumoral edema measurements. by Eric C. Woolf (755935)

“…A 2-fold decrease in peritumoral edema was seen in animals fed KC compared to SD (N = 3; *p < 0.05). …”

Dynamic archaeal and bacterial OTUs within sediment slurry treatments. by Robert J. Martinez (150574)

“…OTUs with a 2-fold or greater decrease in fluorescence were not detected.…”

Dynamic archaeal and bacterial OTUs within sediment slurry treatments. by Robert J. Martinez (150574)

“…OTUs with a 2-fold or greater decrease in fluorescence were not detected.…”

Cluster of differentially expressed genes during broccoli seed germination and sprout development. by Jinjun Gao (528119)

“…Changes in expression levels are shown in color scales with saturation at >2.0-fold changes. Green and red color gradients indicate a decrease and increase in transcript abundance, respectively.…”

Validation of hypoxic conditions by <i>vegfa</i> expression. by Julia E. Weigand (17017)

“…Oxygen starvation (open bar) leads to a 6-fold induction of <i>vegfa</i> compared to normoxic conditions (closed bar). * = p-value<0.05 (Student's t-test). …”

Omeprazole does not block Th2 cytokine-stimulated eotaxin-3 expression in esophageal fibroblasts. by Edaire Cheng (297727)

“…<p>(a) Treatment with omeprazole (OME) does not substantially decrease Th2 cytokine-induced eotaxin-3 mRNA expression at 48 hours in esophageal fibroblast cell lines FEE4-T and BEF-T when compared to esophageal epithelial cell line EoE2T. …”

Reduction in DRG neuronal numbers following error correction. by Ayal Ben-Zvi (438134)

“…L5 DRG of P0 mice were used as an end point of the error correction period. A significant increase in neuron number as compared to wild-type mice is observed in the Sema3A^+/+:BAX^−/− embryos as a result of apoptosis inactivation (P = 0.0041). …”

Effects of Anthropocene on Insect Abundance by Sharan Saravanabavan (795886)

“…On the day of October 13, 2015, the experiment was conducted on a windy, cloudy day with overcast and an initial external temperature of 15°C which then decreased to 11°C by the time we finished collecting data for the day. …”

Timeline of the cognitive reappraisal task. by Jae-Hwan Kang (662310)

“…After a 200 ms blank period, a 4000 ms visual emotional stimulus appeared for the cognitive reappraisal task. …”

Longitudinal cytokine profiling defines the local inflammatory milieu during <i>S. aureus</i> osteomyelitis. by Nicole E. Putnam (838722)

“…Dark grey shading represents a decreasing cytokine fold-changes in <i>S. aureus</i> infected femurs compared to mock infected femurs.…”

Human MADD fibroblast cells display similar mitochondrial defects as <i>xav</i> mutants. by Yuanquan Song (238595)

“…</b> Gene expression assayed by qRT-PCR revealed that <i>PGC-1β</i>, <i>PPARG</i>, <i>ESRRα</i>, <i>UCP3</i> were increased ∼2, 4.6, 2 and 1.6 fold in Patient 1 compared to control. The expression of ROS related genes are also altered in Patient 1, with a ca. 20% decrease in <i>catalase</i> and 4.7 and 5.7 fold increase in <i>glutathione reductase</i> and <i>HSPA9</i> expression (N = 3–7 replicates of cells from passage 7–12; Student's t test, * p<0.05, ** p<0.01, *** p<0.001).…”

The −615 to −624 bp region of the ET_B receptor promoter is the AP-1 binding site in HNPE cells. by Shaoqing He (143800)

“…Following c-Jun overexpression, a similar trend of decrease (57% of the wild-type promoter) in promoter activity was observed in the mutant construct. …”

UBE2N and SMARCA4 as novel targets of miR-101. by Siddharth Manvati (391250)

“…(c & d) Real-Time PCR showing a change in expression using Sybergreen and UBE2N and SMARCA4 specific primers, (c) under miR-101 and anti-miR-101 transfected conditions, showing decrease & increase, respectively, and (d) after 12 hrs exposure to 1uM, 5 uM and 10 uM etoposide, in MCF7 cells, confirming UBE2N and SMARCA4 as targets of miR-101, which is induced to 10 fold with 1 uM etoposide. …”

Quantitative analysis of the effects of nicotinamide phosphoribosyltransferase induction on the rates of NAD⁺ synthesis and breakdown in mammalian cells using stable iso... by Nobumasa Hara (346840)

“…Forced expression of Nampt leading to 6-fold increase in total Nampt activity induced only a 1.6-fold increase in cellular NAD⁺ concentration. …”

Activation of the PPARγ-LXRα-ABC transcriptional cascade by ghrelin is dependent on the PI3-K/Akt pathway. by Annie Demers (369643)

“…Activation of GHS-R1a by ghrelin promotes the recruitment and activation of a Fyn/Dok-1 complex with the subsequent decrease in Erk1/2-mediated phosphorylation of PPARγ Ser-84, restraining its inhibitory potential. …”

Declining trend of <i>Plasmodium falciparum dihydrofolate reductase (dhfr) and dihydropteroate synthase (dhps)</i> mutant alleles after the withdrawal of Sulfadoxine-Pyrimethamine... by Sofonias K. Tessema (802681)

“…The prevalence of mutation in <i>Pfdhfr</i> and <i>Pfdhps</i> genes were evaluated and compared for a total of 159 isolates collected in two different time points, 2005 and 2007/08, from Pawe hospital, in North Western Ethiopia. …”

Relative abundance of complexed tRNAs. by Gilbert Eriani (753452)

“…In other words, it corresponds for each probe, to the relative signal intensity in the complexed tRNA sample divided by the relative signal intensity in total tRNAs (EMSA input), expressed as fold differences. Red indicates an increase in relative amount whereas blue indicates a decrease. …”

Comparison of RNA-Seq and Affymetrix microarray in detection of genes expressed at low levels. by Shanrong Zhao (509890)

“…The high sensitivity of RNA-Seq approach allows detection of a more than 32-fold decrease in MYCL1 mRNA expression upon T cell activation (left panel).…”