Supplementary Material for: Targeting cartilage miR-195/497 cluster for osteoarthritis treatment regulates the circadian clock by Shi S. (2945916)

“…We found that the miR-195/497 cluster targets DUSP3 expression. …”

Supplementary Material for: The inflammatory response induced by Aspergillus fumigatus conidia is dependent on complement activation - Insight from a whole blood model by Fageräng B. (18582337)

“…Methods: Employing a human lepirudin whole-blood model, we analyzed complement and leukocyte activation by measuring the sC5b-9 complex and assessing CD11b expression. …”

Image_2_Orthopedic Surgery Triggers Attention Deficits in a Delirium-Like Mouse Model.TIFF by Ravikanth Velagapudi (7880072)

“…Inattention is often reported in the clinical diagnosis of delirium, however limited attempts have been made to study this cognitive domain in preclinical models. Here we implemented the 5-choice serial reaction time task (5-CSRTT) to evaluate attention in a clinically relevant mouse model following orthopedic surgery. …”

Land Management Practices Associated with House Loss in Wildfires by Philip Gibbons (120631)

“…Significant fuel variables in a logistic regression model we selected to predict house loss were (in order of decreasing effect): (1) the cover of trees and shrubs within 40 m of houses, (2) whether trees and shrubs within 40 m of houses was predominantly remnant or planted, (3) the upwind distance from houses to groups of trees or shrubs, (4) the upwind distance from houses to public forested land (irrespective of whether it was managed for nature conservation or logging), (5) the upwind distance from houses to prescribed burning within 5 years, and (6) the number of buildings or structures within 40 m of houses. …”

TB-HIV co-infection: spatial and temporal distribution in the largest Brazilian metropolis by Roberta Figueiredo Cavalin (10434051)

“…Incidence rates decreased by 3.6% per year (95%CI -4.4% – -2.7%), declining from 7.0 to 5.3 per 100,000 inhabitants/year. …”

Video_1_Orthopedic Surgery Triggers Attention Deficits in a Delirium-Like Mouse Model.MP4 by Ravikanth Velagapudi (7880072)

“…Inattention is often reported in the clinical diagnosis of delirium, however limited attempts have been made to study this cognitive domain in preclinical models. Here we implemented the 5-choice serial reaction time task (5-CSRTT) to evaluate attention in a clinically relevant mouse model following orthopedic surgery. …”

ECOTOXICOLOGICAL ASSESSMENT OF COAL MINING WASTE by Luís Carlos Iuñes de Oliveira Filho (4630246)

“…In survival and reproduction testing of enchytraeids, the value of LC50 (estimated concentration that can cause negative effects on the survival and germination of 50 % of a group of organisms) was below 4 %, and EC50 (negative effects on reproduction) was less than 2.5 % for both soils. …”

Oxidative Addition of Iodomethane to Charge-Tuned Rhodium(I) Complexes by Massimiliano Delferro (1359450)

“…Complex <b>1</b> can be mono- and biprotonated with HX (X = PF₆, OTf, NO₃), forming [Rh(HEtSNS)(CO)]X (<b>2</b>·X) and [Rh(H₂EtSNS)(CO)]X₂ (<b>3</b>·X₂), respectively. A decrease of the calculated DFT Mulliken atomic population on the Rh atom is observed along the series <b>1</b> > <b>2</b> > <b>3</b> in accordance with the variation of the coordinated CO stretching frequency. …”

FBW7 is degraded during <i>E</i>. <i>chaffeensis</i> infection. by Jennifer Y. Wang (8787527)

“…By day 2 pi, FBW7 levels decreased ~50% and ~70%, respectively compared to uninfected controls. …”

Hypothetical plots. by Robert Froud (669335)

ACA dose-dependently inhibited histopathological changes in the lungs of mice with OVA-induced asthma. by Joung-Wook Seo (381837)

“…Bar size, 50 μm; hematoxylin and eosin stain. (b) ACA dose-dependently decreased bronchial secretion of glycoproteins in OVA-induced asthma. …”

Tissue-specific profiles of gene emergence by Juan-Ramon Martinez-Morales (29301)

“…Plots of representative structures of each class of ger value: class I = ger > 3; class II = 3 > ger > 1.5; and class III: ger < 1.5.…”

Table_15_Transcriptome characteristics during cell wall formation of endosperm cellularization and embryo differentiation in Arabidopsis.xlsx by Chengcheng Li (2591632)

“…Nevertheless, the regulatory mechanisms of endosperm cellularization and embryo differentiation remain unclear. Here, we characterized the early embryo and endosperm development of the naa15 mutant that had abnormal embryo differentiation and incomplete endosperm cellularization compared to WT of Arabidopsis, and comparatively investigated the changes of gene expressions in WT seeds at 3, 4, and 5 days after pollination (3W, 4W, and 5W) and the white homozygous aborted naa15 seeds at 5, 6, and 7 DAP (5M, 6M, and 7M) from naa15-1/+ siliques using RNA sequencing and qPCR assays. …”

Table_2_Transcriptome characteristics during cell wall formation of endosperm cellularization and embryo differentiation in Arabidopsis.xlsx by Chengcheng Li (2591632)

“…Nevertheless, the regulatory mechanisms of endosperm cellularization and embryo differentiation remain unclear. Here, we characterized the early embryo and endosperm development of the naa15 mutant that had abnormal embryo differentiation and incomplete endosperm cellularization compared to WT of Arabidopsis, and comparatively investigated the changes of gene expressions in WT seeds at 3, 4, and 5 days after pollination (3W, 4W, and 5W) and the white homozygous aborted naa15 seeds at 5, 6, and 7 DAP (5M, 6M, and 7M) from naa15-1/+ siliques using RNA sequencing and qPCR assays. …”

Table_7_Transcriptome characteristics during cell wall formation of endosperm cellularization and embryo differentiation in Arabidopsis.xls by Chengcheng Li (2591632)

“…Nevertheless, the regulatory mechanisms of endosperm cellularization and embryo differentiation remain unclear. Here, we characterized the early embryo and endosperm development of the naa15 mutant that had abnormal embryo differentiation and incomplete endosperm cellularization compared to WT of Arabidopsis, and comparatively investigated the changes of gene expressions in WT seeds at 3, 4, and 5 days after pollination (3W, 4W, and 5W) and the white homozygous aborted naa15 seeds at 5, 6, and 7 DAP (5M, 6M, and 7M) from naa15-1/+ siliques using RNA sequencing and qPCR assays. …”

Table_1_Altered Urinary Amino Acids in Children With Autism Spectrum Disorders.XLSX by Aiping Liu (149453)

“…Among the significantly changed pathways in ASD children were the ornithine/urea cycle (decreased levels of the excitatory amino acid aspartate [p = 2.15 × 10^-10] and increased arginine/ornithine [p = 5.21 × 10^-9]), tryptophan metabolism (increased levels of inhibitory 5-hydroxytryptamine p = 3.62 × 10^-9), the methionine cycle (increased methionine sulfoxide [p = 1.46 × 10^-10] and decreased homocysteine [p = 2.73 × 10^-7]), and lysine metabolism (reduced lysine [p = 7.8 × 10^-9], α-aminoadipic acid [p = 1.16 × 10^-9], and 5-aminovaleric acid [p = 1.05 × 10^-5]). …”

Table_11_Transcriptome characteristics during cell wall formation of endosperm cellularization and embryo differentiation in Arabidopsis.xlsx by Chengcheng Li (2591632)

“…Nevertheless, the regulatory mechanisms of endosperm cellularization and embryo differentiation remain unclear. Here, we characterized the early embryo and endosperm development of the naa15 mutant that had abnormal embryo differentiation and incomplete endosperm cellularization compared to WT of Arabidopsis, and comparatively investigated the changes of gene expressions in WT seeds at 3, 4, and 5 days after pollination (3W, 4W, and 5W) and the white homozygous aborted naa15 seeds at 5, 6, and 7 DAP (5M, 6M, and 7M) from naa15-1/+ siliques using RNA sequencing and qPCR assays. …”

Table_9_Transcriptome characteristics during cell wall formation of endosperm cellularization and embryo differentiation in Arabidopsis.xlsx by Chengcheng Li (2591632)

“…Nevertheless, the regulatory mechanisms of endosperm cellularization and embryo differentiation remain unclear. Here, we characterized the early embryo and endosperm development of the naa15 mutant that had abnormal embryo differentiation and incomplete endosperm cellularization compared to WT of Arabidopsis, and comparatively investigated the changes of gene expressions in WT seeds at 3, 4, and 5 days after pollination (3W, 4W, and 5W) and the white homozygous aborted naa15 seeds at 5, 6, and 7 DAP (5M, 6M, and 7M) from naa15-1/+ siliques using RNA sequencing and qPCR assays. …”

Table_6_Transcriptome characteristics during cell wall formation of endosperm cellularization and embryo differentiation in Arabidopsis.xls by Chengcheng Li (2591632)

“…Nevertheless, the regulatory mechanisms of endosperm cellularization and embryo differentiation remain unclear. Here, we characterized the early embryo and endosperm development of the naa15 mutant that had abnormal embryo differentiation and incomplete endosperm cellularization compared to WT of Arabidopsis, and comparatively investigated the changes of gene expressions in WT seeds at 3, 4, and 5 days after pollination (3W, 4W, and 5W) and the white homozygous aborted naa15 seeds at 5, 6, and 7 DAP (5M, 6M, and 7M) from naa15-1/+ siliques using RNA sequencing and qPCR assays. …”

Table_12_Transcriptome characteristics during cell wall formation of endosperm cellularization and embryo differentiation in Arabidopsis.xlsx by Chengcheng Li (2591632)

“…Nevertheless, the regulatory mechanisms of endosperm cellularization and embryo differentiation remain unclear. Here, we characterized the early embryo and endosperm development of the naa15 mutant that had abnormal embryo differentiation and incomplete endosperm cellularization compared to WT of Arabidopsis, and comparatively investigated the changes of gene expressions in WT seeds at 3, 4, and 5 days after pollination (3W, 4W, and 5W) and the white homozygous aborted naa15 seeds at 5, 6, and 7 DAP (5M, 6M, and 7M) from naa15-1/+ siliques using RNA sequencing and qPCR assays. …”