Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation by Nagarjuna Nagaraj (1296663)

“…Reducing the target values from a standard of 30 000 to 5000 ions did not severely affect identification rates but did decrease identification and localization scores for phosphorylation sites. …”

Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation by Nagarjuna Nagaraj (1296663)

“…Reducing the target values from a standard of 30 000 to 5000 ions did not severely affect identification rates but did decrease identification and localization scores for phosphorylation sites. …”

Simultaneous PreCaT and extracellular field potential recordings. by Carmelo Sgobio (652457)

“…Effects of application of a cocktail of antagonists of ionotropic glutamate and GABA receptors ((2R)-amino-5-phosphonovaleric acid (APV, 50 µM); 2,3-dihydroxy-6-nitro-7-sulfamoyl-benzo[f]quinoxaline-2,3-dione (NBXQ, 10 µM)) are also shown. …”

Female motorcycle mortality in Brazilian municipalities, 2005, 2010 and 2015 by Pedro Cisalpino Pinheiro (6070499)

“…In the municipalities of the South and Southeast regions, mainly in the period between 2010 and 2015, there was an apparent decrease in mortality. The percentage variation showed a reduction in the indicator analyzed in the period between 2010 and 2015 for the largest municipalities in the South and Southeast regions. …”

Neutralization by PGT121-137 antibodies and chimeric variants. by Marie Pancera (335526)

“…<p>Strong neutralization is coded in red (>90%), intermediate in yellow (75–90%) and weak in green (50–75%). Neutralization data were generated in single neutralization experiments, with each test sample analyzed in duplicate to determine the percent decrease in virus growth (neutralization) as compared and normalized to the control wells without antibody expression (defined as 0% neutralization). …”

H35N induced cell death and changes in nuclear morphology in presence of pan-caspase inhibitor zVADfmk: by Saumya S. Srivastava (262013)

“…<p>(A) A431 cells either left untreated or treated with H35N (8 µg/ml) or zVADfmk (50 µM) for 2 hr followed by addition of H35N (8 µg/ml) for the indicated time which were then mildly trypsinised and viable cells were counted after staining with trypan blue as mentioned in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0006293#s2" target="_blank">materials and methods</a>. …”

Cognitive control of saccadic eye movements in children with developmental coordination disorder by CLAUDIA GONZALEZ (1390035)

“…These included anticipatory saccades from the Cued conditions as these occurred in more than 50% of trials in the DCD group. All graphs show significant R² values, which reveal a linear relationship between these saccade parameters in both groups and show the mean slopes obtained from each participant’s main sequence. …”

Schematic of the filtration setup and flowmeter device used in this study. by Corentin Fournier (5088941)

“…<p>We used overpressure filtration for plankton size-class filtration with three filters in series, (<i>i</i>) a 180-μm nylon net pre-filter to remove zooplankton and larger particles, and (<i>ii</i>) a 5.0-μm and (<i>iii</i>) a 0.2-μm pore-size polycarbonate membrane filter, in order to collect the nanoplankton and picoplankton, respectively, for DNA extraction. …”

zCFTR shows different responses to ATP and phosphate analogues. by Jingyao Zhang (241197)

“…<b>(C)</b> A real time recording of WT-zCFTR shows a slight decrease of the macroscopic current upon switching the ligand from 2 mM ATP to 50 μM P-ATP. …”

Data presented in the paper "Consumer and host body size effects on the removal of trematode cercariae by ambient communities" by J. (Jennifer) Welsh (9158432)

“…One individual was The effect of dilutor size on removal rates of cercariae was investigated in laboratory experiments by determining removal rates of five size categories of each dilutor species (Table 1). In addition, a sixth treatment without dilutors served as a control to account for potential loses of cercariae due other factors (knowing the number of added cercariae was 50) and to test for the presence of a dilution effect (control vs. dilutor size treatments). …”

Histograms and quartile box plot of entropy losses in 2725 prokaryotic replicons truncated at 1% entropy loss in order to see the finer breakdown. by Hsueh-Ting Chu (395362)

“…It is clear that as read length increases, the entropy loss decreases. As a result, a higher number of replicons have ΔH <1.0%.…”

Data_Sheet_1_Molybdenum and Cadmium Co-induce Mitochondrial Quality Control Disorder via FUNDC1-Mediated Mitophagy in Sheep Kidney.doc by Yunhui Wu (2995374)

“…Forty-eight 2-month-old sheep were stochastically divided into four groups, as shown below: control group, Mo [45 mg/kg body weight (BW)] group, Cd (1 mg/kg BW) group and Mo (45 mg/kg BW)+Cd (1 mg/kg BW) group, with 50 days feed technique. The results showed that Mo or/and Cd attract an unbalance of trace minerals and vacuoles and granular degeneration of renal tubular epithelial cells, and increase the number of mitophagosomes and vacuole-mitochondria and LC3 puncta and MDA and H₂O₂ contents, and decrease ATP content in the kidney. …”

Red Blood Cell Transfusion and Mortality in Trauma Patients: Risk-Stratified Analysis of an Observational Study by Pablo Perel (102217)

“…Transfusion was associated with an increase in all-cause mortality among patients with &lt;6% and 6%–20% predicted risk of death (odds ratio [OR] 5.40, 95% CI 4.08–7.13, <i>p&lt;</i>0.0001, and OR 2.31, 95% CI 1.96–2.73, <i>p&lt;</i>0.0001, respectively), but with a decrease in all-cause mortality in patients with &gt;50% predicted risk of death (OR 0.59, 95% CI 0.47–0.74, <i>p&lt;</i>0.0001). …”

Depletion of free PI(3)P, PI(4,5)P₂ and PI(3,4,5)P₃ binding sites in <i>G</i>. <i>lamblia</i> trophozoites elicits uptake and morphological phenotypes. by Lenka Cernikova (2885315)

Equilibrium binding of single strand DNA (P1) from promoter with mNdK by Praveen Kumar (8242)

“…CD spectra of P1 (4 μM) shows decrease in ellipticity at 285 nm with increasing mNdK (0–0.5 μM) in 50 mM Tris-MES-acetate pH 6.5, 1 mM MgCl, 75 mM NaCl within 30 min of incubation, after each addition, at 37°C. () Enzymatic (phosphotransfer) activity of mNdK at pH 6.5. …”

HepR21 cells have increased resilience to nutrient deprivation compared to HepG2 cells. by Paramita Saha (473954)

“…A set of cells were kept as control. The survivability of HepR21 cells was found to remain unaffected while HepG2 cells were highly sensitive upon prolonged starvation with an overall 50% decrease in growth after 36 h of starvation. …”

Protein level affects epitope detection. by Phyllis S. Frisa (370425)

“…Cyclin B1 intensity was maximal at 25–50 µg trypsin inhibitor and decreased at lower and higher protein levels. …”

The figure shows the similarity score (solid line) plotted versus the progression of the clustering process for a sample protein set that was tested by Noam Kaplan (5556)

Effect of adipose-derived stem cells (ASCs) on cytokine levels in bronchoalveolar lavage fluid. by Kyu-Sup Cho (770125)

miRNA expression is altered in NSCs from diabetic pregnancy. by Sukanya Shyamasundar (420641)

“…The nucleus is counterstained with DAPI (blue). Scale bar: 50 µm. (C) miRNA expression analysis revealed decreased expression of miRNAs mmu-miR-200a, mmu-miR-200b, mmu-miR-466a-3p and mmu-miR-466d-3p in NSCs from diabetic pregnancy (open bars) when compared to the control (filled bars). …”