Supplementary Material for: Increased Quinolone-Resistant Mutations of gyrA and parC Genes after Pouchitis Treatment with Ciprofloxacin by Fukushima K. (4865416)

“…Nucleic acid and amino acid mutations were identified at <i>gyrA</i> 83 and 87, and at <i>parC</i> 80 and 84. We successfully quantified mutation rates at <i>gyrA</i> 83 and 87, and at <i>parC</i> 84, all of which were significantly higher in samples from CFX-treated patients (70, 84, and 38%) than from CFX-untreated patients (13, 11, and 5%). …”

The raw data of IF and HE in this study. by Yan Wang (15435)

“…Moreover, using <i>Adap</i>^<i>-/-</i> mice, we show ADAP deficiency strongly increases the susceptibility of macrophages to RNA-virus infection <i>in vivo</i>. …”

Variation in Honey Bee Gut Microbial Diversity Affected by Ontogenetic Stage, Age and Geographic Location by Zuzana Hroncova (701561)

“…We found that bacterial counts do not show only yearly cycles within a colony, but vary on the individual level. …”

Data_Sheet_1_Opportunities and Challenges From Leading Trends in a Biomonitoring Project: Canadian Health Measures Survey 2007–2017.xls by Yi-Sheng Chao (4383916)

“…</p><p>Methods: We implemented a trend analysis for all variables from CHMS biomonitoring data cycles 1–5 conducted between 2007 and 2017. …”

The flowchart of participants. by Xuankai Qin (14564600)

“…Weighted linear regression analysis was employed to explore the relationship between BRI and the urine albumin-creatinine ratio (UACR). Additionally, we applied smooth curve fitting to investigate their non-linear relationship and conducted threshold effect analysis to identify any turning point.…”

Data_Sheet_1_Impact of the COVID-19 Pandemic and Public Restrictions on Outcomes After Catheter Ablation of Atrial Fibrillation.PDF by Daehoon Kim (11601205)

“…</p>Methods<p>We included 453 patients who underwent de novo AFCA between May 2018 and October 2019 (pre-COVID-19 era) and 601 between November 2019 and April 2021 (COVID-19 era). …”

Conserved BK Channel-Protein Interactions Reveal Signals Relevant to Cell Death and Survival by Bernd Sokolowski (192763)

“…Functional studies using recombinant BK and RNAi in a heterologous expression system revealed that proteins important to cell death/survival, such as annexinA5, γ-actin, lamin, superoxide dismutase, and VCP, caused a decrease in BK expression. …”

Presentation_1_Lactobacillus sakei WIKIM30 Ameliorates Atopic Dermatitis-Like Skin Lesions by Inducing Regulatory T Cells and Altering Gut Microbiota Structure in Mice.pptx by Min-Sung Kwon (394679)

“…Oral administration of L. sakei WIKIM30 significantly reduced AD-like skin lesions and serum immunoglobulin E and IL-4 levels while decreasing the number of CD4⁺ T cells and B cells and the levels of Th2 cytokines (IL-4, IL-5, and IL-13) in peripheral lymph nodes and enhancing Treg differentiation and IL-10 secretion in mesenteric lymph nodes. …”

Data_Sheet_1_Cerebrospinal fluid micro-volume changes inside the spinal space affect intracranial pressure in different body positions of animals and phantom.PDF by Marijan Klarica (584483)

“…When a fluid volume (CSF or artificial CSF) was removed from the spinal space, both lumbar and cranial CSFP pressures decreased by 2.0–2.5 cm H₂O for every extracted 100 μL. …”

Table_1_The Adipose Microenvironment Dysregulates the Mammary Myoepithelial Cells and Could Participate to the Progression of Breast Cancer.XLSX by Laetitia Delort (390472)

“…We found that adipose cells (precursors and differentiated adipocytes) could decrease the viability of the MECs, regardless of the original BMI. …”

Table 2_Unveiling the immunological landscape of disseminated tuberculosis: a single-cell transcriptome perspective.xlsx by Zhen Gong (292434)

“…Additionally, we integrated and analyzed data from two published profiles of latent TB infection, three active TB cases, and two healthy controls.…”

Data_Sheet_1_Improved Microbial Community Characterization of 16S rRNA via Metagenome Hybridization Capture Enrichment.PDF by Megan S. Beaudry (10705500)

“…These baits cover the diversity of all 16S rRNA sequences available in the Greengenes (v. 13.5) database, with no sequence having <78% sequence identity to at least one bait for all segments of 16S. …”

Chikungunya Fever: A Clinical and Virological Investigation of Outpatients on Reunion Island, South-West Indian Ocean by Simon-Djamel Thiberville (102397)

“…The evolution of acute CHIK included 2 stages: the ‘viral stage’ (day 1–day 4) was associated with rapid decrease of viraemia and improvement of clinical presentation; the ‘convalescent stage’ (day 5–day 14) was associated with no detectable viraemia but a slower clinical improvement. …”

Data_Sheet_1_SERS-Based Evaluation of the DNA Methylation Pattern Associated With Progression in Clonal Leukemogenesis of Down Syndrome.PDF by Vlad Moisoiu (6032828)

“…<p>Here we show that surface-enhanced Raman scattering (SERS) analysis captures the relative hypomethylation of DNA from patients with acute leukemia associated with Down syndrome (AL-DS) compared with patients diagnosed with transient leukemia associated with Down syndrome (TL-DS), an information inferred from the area under the SERS band at 1005 cm^–1 attributed to 5-methycytosine. …”

Image 1_Unveiling the immunological landscape of disseminated tuberculosis: a single-cell transcriptome perspective.jpeg by Zhen Gong (292434)

“…Additionally, we integrated and analyzed data from two published profiles of latent TB infection, three active TB cases, and two healthy controls.…”

Table 1_Unveiling the immunological landscape of disseminated tuberculosis: a single-cell transcriptome perspective.xlsx by Zhen Gong (292434)

“…Additionally, we integrated and analyzed data from two published profiles of latent TB infection, three active TB cases, and two healthy controls.…”

Performance of next-generation sequencing on small tumor specimens and/or low tumor content samples using a commercially available platform by Scott Morris (5150672)

“…The number of genes with insufficient sensitivity make definitive mutation calls increased as the percentage of tumor decreased, reaching statistical significance below 5% tumor content. …”

DataSheet1_Trends and Transitions in Silicate Weathering in the Asian Interior (NE Tibet) Since 53 Ma.DOCX by Yibo Yang (8977910)

“…This might suggest some contribution of the Antarctic ice sheets on modulating the regional silicate weathering in the NE Tibetan Plateau on a timescale of 10⁵–10⁶ years, through its influences on the EASM as proposed by previous studies.…”

DataSheet_2_The IgH Eµ-MAR regions promote UNG-dependent error-prone repair to optimize somatic hypermutation.pdf by Ophélie A. Martin (14611112)

“…Interestingly, by breeding to DNA repair-deficient backgrounds, we showed that the SHM defect, observed upstream from cEµ in this model, was not due to a decrease in AID deamination but rather the consequence of a defect in base excision repair-associated unfaithful repair process.…”

Image 2_Unveiling the immunological landscape of disseminated tuberculosis: a single-cell transcriptome perspective.jpeg by Zhen Gong (292434)

“…Additionally, we integrated and analyzed data from two published profiles of latent TB infection, three active TB cases, and two healthy controls.…”