S1 File - by Michael Gulledge (20577135)

“…The goal of this study was to establish an in-depth, temporal signature of spontaneous oxycodone withdrawal effects on the diurnal composition of discrete sleep stages and the dynamic spectral properties of the electroencephalogram (EEG) signal in male rats. We continuously recorded EEG and electromyography (EMG) signals for 8 d of spontaneous withdrawal after a 14-d escalating-dose oxycodone regimen (0.5–8.0 mg/kg, 2×d; SC). …”

Image_5_Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation of Riesling Must.TIFF by Kimmo Sirén (6567302)

“…During alcoholic fermentation, we observed a general decrease in biodiversity in both the metabarcoding and metagenomic data. …”

DataSheet_1_Computation of Antigenicity Predicts SARS-CoV-2 Vaccine Breakthrough Variants.docx by Ye-Fan Hu (10307357)

“…Our predicted results were comparable to experimental neutralization titers of variants, including Alpha, Beta, Delta, Gamma, Epsilon, Iota, Kappa, and Lambda, as well as SARS-CoV. Here, we predicted the fold of decrease of Omicron as 17.4-fold less susceptible to neutralization. …”

Table_1_LRP5-Mediated Lipid Uptake Modulates Osteogenic Differentiation of Bone Marrow Mesenchymal Stromal Cells.XLSX by Jiachen Lin (9381248)

“…Conditional knockout (CKO) of Lrp5 gene in murine mesenchymal lineage using Lrp5^fl/fl;Prrx1-cre mice led to decreased bone quality and altered fat distribution in vivo. …”

Time series of precipitation anomalies over the tropical oceans and land; ((a), (b)) over the wet tropical oceans and land; ((c), (d)) over the dry tropical oceans and land by Chunlei Liu (57542)

“…The reference period for CMIP5 historical and RCP 4.5 model simulations are from 1860 to 1950 and from 1988 to 2005 for GPCP and GPCC. …”

Supplementary Material for: <b><i>NT5C2</i></b> Gene Polymorphisms and the Risk of Coronary Heart Disease by Chen X. (2888087)

“…Stratification analysis was performed by age and gender in all individuals; we especially investigated the effects of <i>NT5C2</i> SNPs on hypertension and diabetes among CHD patients. …”

Data Sheet 1_RPL41 inhibits the proliferation and migration of retinoblastoma through the ARL5B-associated lysosomal trafficking.pdf by Ye Li (290115)

“…We also explored ATF4’s regulatory role on ARL5B expression through chromatin immunoprecipitation (ChIP) experiments and luciferase reporter gene assays.…”

Table 1_RPL41 inhibits the proliferation and migration of retinoblastoma through the ARL5B-associated lysosomal trafficking.xlsx by Ye Li (290115)

“…We also explored ATF4’s regulatory role on ARL5B expression through chromatin immunoprecipitation (ChIP) experiments and luciferase reporter gene assays.…”

The anti-cancer drug 5-fluorouracil affects cell cycle regulators and potential regulatory long non-coding RNAs in yeast by Bingning Xie (2863295)

“…RNA profiling of synchronized 5-FU treated yeast cells and protein assays reveal that the drug specifically inhibits a set of cell cycle regulated genes involved in mitotic division, by decreasing levels of the paralogous Swi5 and Ace2 transcriptional activators. …”

Table5_Causal relationship between physical activity and platelet traits: a Mendelian randomization study.XLSX by Mingyuan Jia (13117449)

Dynamics of CHT internalization are altered by acute insulin treatment. by Katherine J. Fishwick (768451)

Image_1_Weighted Gene Co-expression Network Analysis for RNA-Sequencing Data of the Varicose Veins Transcriptome.TIF by Jianbin Zhang (230061)

Data_Sheet_1_Weighted Gene Co-expression Network Analysis for RNA-Sequencing Data of the Varicose Veins Transcriptome.CSV by Jianbin Zhang (230061)

Image_2_Weighted Gene Co-expression Network Analysis for RNA-Sequencing Data of the Varicose Veins Transcriptome.TIF by Jianbin Zhang (230061)

Cellular uptake of [¹⁴C]docosahexaenoic acid (DHA) by RBECs transfected with MFSD2A siRNA. by Takuro Iwao (14636741)

Custom DNA Microarrays Reveal Diverse Binding Preferences of Proteins and Small Molecules to Thousands of G‑Quadruplexes by Sreejana Ray (4583467)

“…Cy5-PDS binding decreased when G4 formation was inhibited using lithium or when ssDNA features on the microarray were made double-stranded. …”

Custom DNA Microarrays Reveal Diverse Binding Preferences of Proteins and Small Molecules to Thousands of G‑Quadruplexes by Sreejana Ray (4583467)

“…Cy5-PDS binding decreased when G4 formation was inhibited using lithium or when ssDNA features on the microarray were made double-stranded. …”

Antibody-Mediated Internalization of Infectious HIV-1 Virions Differs among Antibody Isotypes and Subclasses by Matthew Zirui Tay (3140493)

“…For instance, in the RV144 vaccine trial that achieved partial efficacy, Env IgA correlated with increased risk of HIV-1 infection (i.e. decreased vaccine efficacy), whereas V1-V2 IgG3 correlated with decreased risk of HIV-1 infection (i.e. increased vaccine efficacy). …”

qPCR primer sequences. by Shuaini Yang (20670608)

“…<div><p>CCR2, a member of the G protein-coupled receptor (GPCR) superfamily, is widely expressed on monocytes, macrophages, activated T cells, and other cell types, and plays a critical role in coordinating the immune response to various infections. Here we demonstrate that CCR2 expression is significantly elevated during Chlamydia muridarum (<i>C</i>. …”

Critical Role of Klf5 in Regulating Gene Expression during Post-Eyelid Opening Maturation of Mouse Corneas by Doreswamy Kenchegowda (135193)

“…Here, we quantify WT and <em>Klf5</em>-conditional null (<em>Klf5</em>CN) corneal gene expression, identify Klf5-target genes and compare them with the previously identified Klf4-target genes to understand the molecular basis for non-redundant functions of Klf4 and Klf5 in the cornea.…”