Data Sheet 1_Virus-specific host responses and gene signatures following infection with major SARS-CoV-2 variants of concern: role of ZBP1 in viral clearance and lung inflammation.... by Amany Elsharkawy (18285577)

“…Herein, using RNA sequencing, we performed a comparative transcriptomic analysis following infection with major VOCs. …”

Image_3_O-GlcNAc transferase regulates collagen deposition and fibrosis resolution in idiopathic pulmonary fibrosis.tif by Shia Vang (18342582)

“…</p>Results<p>We found that OGT and O-GlcNAc levels are upregulated in patients with IPF compared to non-IPF. …”

Image_1_O-GlcNAc transferase regulates collagen deposition and fibrosis resolution in idiopathic pulmonary fibrosis.tif by Shia Vang (18342582)

“…</p>Results<p>We found that OGT and O-GlcNAc levels are upregulated in patients with IPF compared to non-IPF. …”

Table_1_O-GlcNAc transferase regulates collagen deposition and fibrosis resolution in idiopathic pulmonary fibrosis.xlsx by Shia Vang (18342582)

“…</p>Results<p>We found that OGT and O-GlcNAc levels are upregulated in patients with IPF compared to non-IPF. …”

Table 1_Virus-specific host responses and gene signatures following infection with major SARS-CoV-2 variants of concern: role of ZBP1 in viral clearance and lung inflammation.xlsx by Amany Elsharkawy (18285577)

“…Herein, using RNA sequencing, we performed a comparative transcriptomic analysis following infection with major VOCs. …”

Data_Sheet_1_Genome-Wide Comparative Analysis of R2R3 MYB Gene Family in Populus and Salix and Identification of Male Flower Bud Development-Related Genes.ZIP by Fangwei Zhou (11430235)

“…Identified 5 subgroups in general expanded in woody species, three subgroups were predicted to be related to lignin synthesis, and we further speculate that the other two subgroups also play a role in wood formation. …”

image1_Phenotypical Changes of Hematopoietic Stem and Progenitor Cells in Sepsis Patients: Correlation With Immune Status?.jpg by Ping Wang (42415)

“…Importantly, we found a negative correlation between CD34⁺ on day 1 and WBC and lymphocytes on day 4 from correlation analysis in sepsis patients.…”

Image_2_O-GlcNAc transferase regulates collagen deposition and fibrosis resolution in idiopathic pulmonary fibrosis.tif by Shia Vang (18342582)

“…</p>Results<p>We found that OGT and O-GlcNAc levels are upregulated in patients with IPF compared to non-IPF. …”

DataSheet1_Spatial distribution of non-point source pollution from total nitrogen and total phosphorous in the African city of Mwanza (Tanzania).docx by Yunlong Zong (15458429)

“…We have then evaluated non-point source pollution based on nitrogen and phosphorus loads at a spatial scale in Mwanza city (Tanzania). …”

MMP-9 inhibition promotes anti-tumor immunity through disruption of biochemical and physical barriers to T-cell trafficking to tumors by Vladi Juric (6033989)

“…<div><p>Matrix metalloproteinase-9 (MMP-9), whose expression is frequently dysregulated in cancer, promotes tumor growth, invasion, and metastasis by multiple mechanisms, including extracellular matrix remodeling and growth-factor and cytokine activation. We developed a monoclonal antibody against murine MMP-9, which we found decreased growth of established primary tumors in an orthotopic model of HER2-driven breast cancer (HC11-NeuT) in immunocompetent mice. …”

Data_Sheet_1_Contrasting Carbon Allocation Strategies of Ring-Porous and Diffuse-Porous Species Converge Toward Similar Growth Responses to Drought.pdf by Valentina Buttó (11843894)

“…Drought induces the formation of fewer xylem vessels in ring-porous species, and smaller xylem vessels in diffuse-porous species, the latter being also prone to a decline in stem elongation due to a reduced number of ramifications. …”

DataSheet_1_Use of gliptins reduces levels of SDF-1/CXCL12 in bullous pemphigoid and type 2 diabetes, but does not increase autoantibodies against BP180 in diabetic patients.docx by Antti Nätynki (332450)

“…Sitagliptin was the most frequently prescribed gliptin (125/136 patients). Using an ELISA assay, we showed that IgG autoantibodies against the immunodominant NC16A domain of BP180 were found in 5.9% of gliptin treated and in 6.6% of non-gliptin treated T2D patients. …”

Data_Sheet_2_Understanding the Representative Gut Microbiota Dysbiosis in Metformin-Treated Type 2 Diabetes Patients Using Genome-Scale Metabolic Modeling.xlsx by Dorines Rosario (5445560)

“…The mechanisms underlying these nutritional alterations and their relation with gut microbiota dysbiosis remain unclear. Here, we used Genome-scale Metabolic Models of the representative gut bacteria Escherichia spp., I. bartlettii, A. muciniphila, and S. variabile to elucidate their bacterial metabolism and its effect on intestinal nutrient pool, including macronutrients (e.g., amino acids and short chain fatty acids), minerals and chemical elements (e.g., iron and oxygen). …”

DataSheet1_Multiple Myeloma Patient Tumors With High Levels of Cereblon Exon-10 Deletion Splice Variant Upregulate Clinically Targetable Pro-Inflammatory Cytokine Pathways.xlsx by Kubra Karagoz (6670640)

“…Although we did not find significant general splicing defects among patients with CRBN exon-10 splice variant when compared to those expressing the full-length transcript, we identified upregulated TNFA signaling via NFKB, inflammatory response, and IL-10 signaling pathways in patients with exon-10 splice variant across various data sets—all potentially promoting tumor growth via chronic growth signals. …”

Network analysis of pig movements: Loyalty patterns and contact chains of different holding types in Denmark by Jana Schulz (4183195)

“…All production sites showed low levels of in-going contact chains and we observed a high level of out-going contact chain for breeding and multiplier herds. …”

Effects of Mesenchymal Stem Cell Treatment on the Expression of Matrix Metalloproteinases and Angiogenesis during Ischemic Stroke Recovery by Hyo Suk Nam (147882)

“…After MSC treatment, we also investigated the expression of matrix metalloproteinases (MMPs), which play a role in vascular and tissue remodeling.…”

Image_3_Fixel-Based Analysis and Free Water Corrected DTI Evaluation of HIV-Associated Neurocognitive Disorders.tiff by Alan Finkelstein (1956799)

“…<p>Background: White matter (WM) damage is a consistent finding in HIV-infected (HIV+) individuals. …”

Image_5_Fixel-Based Analysis and Free Water Corrected DTI Evaluation of HIV-Associated Neurocognitive Disorders.tiff by Alan Finkelstein (1956799)

“…<p>Background: White matter (WM) damage is a consistent finding in HIV-infected (HIV+) individuals. …”

Data_Sheet_6_Understanding the Representative Gut Microbiota Dysbiosis in Metformin-Treated Type 2 Diabetes Patients Using Genome-Scale Metabolic Modeling.XLSX by Dorines Rosario (5445560)

“…The mechanisms underlying these nutritional alterations and their relation with gut microbiota dysbiosis remain unclear. Here, we used Genome-scale Metabolic Models of the representative gut bacteria Escherichia spp., I. bartlettii, A. muciniphila, and S. variabile to elucidate their bacterial metabolism and its effect on intestinal nutrient pool, including macronutrients (e.g., amino acids and short chain fatty acids), minerals and chemical elements (e.g., iron and oxygen). …”

Data_Sheet_8_Understanding the Representative Gut Microbiota Dysbiosis in Metformin-Treated Type 2 Diabetes Patients Using Genome-Scale Metabolic Modeling.XLSX by Dorines Rosario (5445560)

“…The mechanisms underlying these nutritional alterations and their relation with gut microbiota dysbiosis remain unclear. Here, we used Genome-scale Metabolic Models of the representative gut bacteria Escherichia spp., I. bartlettii, A. muciniphila, and S. variabile to elucidate their bacterial metabolism and its effect on intestinal nutrient pool, including macronutrients (e.g., amino acids and short chain fatty acids), minerals and chemical elements (e.g., iron and oxygen). …”