Identifying the groups becomes harder when the degradation chain is long, especially for groups catalyzing upstream reactions. by Yuanchen Zhao (12905580)

“…As the chain becomes longer, the ability to recover the most upstream group drops quickly, whereas the direct producers are adequately recovered up to length 5. In both panels, shading indicates the standard error of the mean over 50 synthetic datasets, circles indicate data points for Metropolis while triangles for random groupings.…”

Non-parametric regression of the number of basic cognitive units (BCU) on age. by Raúl de la Fuente-Fernández (42989)

“…</p> <p>Again, circle sizes are proportional to the square root of the number of Alzheimer's cases, asterisks represent very small circles, the solid curve was obtained using <i>sm</i>, and the dashed curve was obtained using <i>loess</i> (span = 1).</p> <p>Data points were directly derived from the <i>z</i>-scores associated with the corresponding Alzheimer's incidence rates, using the equation: BCU|age = 0.5−0.1× <i>z</i>-score, where the threshold (<i>c</i>) is 0.5, and the standard deviation (SD) is 0.1 (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0000052#s2" target="_blank">Methods</a>).…”

Role of radiation-induced activation of the P53-P21 pathway in senescence and migration. by Natsuko Imaizumi (247038)

“…Double strand breaks were repaired within 24 hours. (n = 5). Bars = 5 µm. (b) The expression level of three senescence-associated proteins, P16, P21 and P53, was analyzed by Western blotting before (0 hours) and after radiation at indicated time points. …”

DataSheet_2_The transcriptome response of astronaut leukocytes to long missions aboard the International Space Station reveals immune modulation.pdf by Daniel Stratis (16415880)

“…</p>Methods<p>Fourteen male and female astronauts with ~6-month- long missions aboard the International Space Station (ISS) had 10 blood samples collected throughout the three phases of the study: one pre-flight (PF), four in-flight (IF) while onboard the ISS, and five upon return to Earth (R). We measured gene expression through RNA sequencing of leukocytes and applied generalized linear modeling to assess differential expression across all 10 time points followed by the analysis of selected time points and functional enrichment of changing genes to identify shifts in biological processes.…”

DataSheet_3_The transcriptome response of astronaut leukocytes to long missions aboard the International Space Station reveals immune modulation.pdf by Daniel Stratis (16415880)

“…</p>Methods<p>Fourteen male and female astronauts with ~6-month- long missions aboard the International Space Station (ISS) had 10 blood samples collected throughout the three phases of the study: one pre-flight (PF), four in-flight (IF) while onboard the ISS, and five upon return to Earth (R). We measured gene expression through RNA sequencing of leukocytes and applied generalized linear modeling to assess differential expression across all 10 time points followed by the analysis of selected time points and functional enrichment of changing genes to identify shifts in biological processes.…”

DataSheet_4_The transcriptome response of astronaut leukocytes to long missions aboard the International Space Station reveals immune modulation.pdf by Daniel Stratis (16415880)

“…</p>Methods<p>Fourteen male and female astronauts with ~6-month- long missions aboard the International Space Station (ISS) had 10 blood samples collected throughout the three phases of the study: one pre-flight (PF), four in-flight (IF) while onboard the ISS, and five upon return to Earth (R). We measured gene expression through RNA sequencing of leukocytes and applied generalized linear modeling to assess differential expression across all 10 time points followed by the analysis of selected time points and functional enrichment of changing genes to identify shifts in biological processes.…”

DataSheet_1_The transcriptome response of astronaut leukocytes to long missions aboard the International Space Station reveals immune modulation.pdf by Daniel Stratis (16415880)

“…</p>Methods<p>Fourteen male and female astronauts with ~6-month- long missions aboard the International Space Station (ISS) had 10 blood samples collected throughout the three phases of the study: one pre-flight (PF), four in-flight (IF) while onboard the ISS, and five upon return to Earth (R). We measured gene expression through RNA sequencing of leukocytes and applied generalized linear modeling to assess differential expression across all 10 time points followed by the analysis of selected time points and functional enrichment of changing genes to identify shifts in biological processes.…”

Table_1_The transcriptome response of astronaut leukocytes to long missions aboard the International Space Station reveals immune modulation.docx by Daniel Stratis (16415880)

“…</p>Methods<p>Fourteen male and female astronauts with ~6-month- long missions aboard the International Space Station (ISS) had 10 blood samples collected throughout the three phases of the study: one pre-flight (PF), four in-flight (IF) while onboard the ISS, and five upon return to Earth (R). We measured gene expression through RNA sequencing of leukocytes and applied generalized linear modeling to assess differential expression across all 10 time points followed by the analysis of selected time points and functional enrichment of changing genes to identify shifts in biological processes.…”

The Negative Effects of Increasing Canopy Coverage on Plants by Bonnie Chan (3114120)

“…<br> <br> The last observer completed two point surveys: the first point survey consisted of a 50m radius and the second a 5m radius. …”

Dual effects of propofol on C2C12 cells. by Xi Chen (35903)

“…<p>(A) Exposure for 48 h to 25, 50, 100, 150, and 250 μM propofol significantly increased cell count relative to that of the control in a concentration-dependent manner. …”

AFM images of the rhombic lattice arrangement of microvilli—AC mode. by Jonas Franz (843020)

“…(<b>A</b>) Overview of Caco-2 cells recorded with 1024 data point per scan line. At this image size the amplitude set point must be decreased to image the whole range in z of 1.5 μm. …”

Analysis of differential microbiome and classification prediction model between case and control groups. by Chuan Zhang (187157)

“…The receiver operating characteristic (ROC) curve was generated using 5 genera in the faecal microbiota. The relative importance of each genus in the predictive model was evaluated using the mean decreasing accuracy and the Gini coefficient.…”

DataSheet1_Effect of Sperm Cryopreservation on miRNA Expression and Early Embryonic Development.docx by Xiaoyu Xu (356293)

Phloroglucinol ameliorates the reduction in dendritic synaptic density- induced by Aβ_1–42 in primary hippocampal neuron cultures. by Eun-Jeong Yang (784567)

“…Treatment with hydrogen peroxide significantly decreased the spine density (4.27 ± 0.13 spines/10 μm, n = 43, ***<i>p</i> < 0.001) compared with the control treatment (7.07 ± 0.28 spines/10 μm, n = 50). …”

Thymic Treg numbers were maintained in NOD mice on days 14 and 21 after infection. by Nicole L. Webster (390405)

“…Each data point represents a pool of cells from 4 to 5 mice, normalized to represent cells/mouse. …”

Effects of adipose-derived stem cells (ASCs) on airway hyperresponsiveness (AHR) and inflammatory cells in the bronchoalveolar lavage fluid (BALF). by Kyu-Sup Cho (770125)

Effects of <em>APOA5 −1131T>C</em> (rs662799) on Fasting Plasma Lipids and Risk of Metabolic Syndrome: Evidence from a Case-Control Study in China and a Meta-Analysis by Chunxiao Xu (311834)

DARPP-32 mediated signaling network shows dopamine-dependent gating of CaMKII/PP1 signaling and input-interval constraint. by Anu G. Nair (461390)

“…The amplitude of the calcium and dopamine inputs is 5μM and 1.5 μM, respectively. (H) pSubstrate trace for different Δt. …”

Data_Sheet_1_Quantification of Blood Caffeine Levels in Patients With Parkinson's Disease and Multiple System Atrophy by Caffeine ELISA.docx by Takuma Ohmichi (718120)

“…In the second cohort of 50 PD patients, 50 MSA patients and 45 age-matched controls, plasma caffeine levels were significantly decreased in both PD and MSA groups compared to Controls (p < 0.001). …”

Dietary Effects on Cuticular Hydrocarbons and Sexual Attractiveness in <em>Drosophila</em> by Tatyana Y. Fedina (114609)