Abnormal H3K9me2 accumulation in <i>csr-1</i>, <i>ekl-1</i>, and <i>drh-3</i> mutants. by Xingyu She (260537)

“…In both germ lines, H3K9me2 is first detected at early pachytene stage. (A') In the N2 germ line, a single strong focus of H3K9me2 labeling corresponds to the single X chromosome (as described in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1000624#pgen.1000624-Kelly2" target="_blank">[4]</a>); other chromosomes accumulate a low level of H3K9me2 (as described in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1000624#pgen.1000624-Maine1" target="_blank">[9]</a>). …”

Effect of amikacin-humic acid combination on <i>Acinetobacter baumannii</i> biofilm: an <i>in vitro</i> and <i>in silico</i> study by Seetha Lakshmi Rajangam (19921021)

“…</p> <p><b>Results:</b> The amikacin-humic acid combination significantly inhibited both the biofilm formation and cell viability of <i>A. baumannii</i> SLMK001. The images observed via Scanning Electron Microscope (SEM) showed a significant decrease in the biofilm matrix. …”

Time traces of the end-to-end length of DNA. by Rifka Vlijm (133750)

“…The end-to-end length decreases in an exponential way until a plateau is reached at 66% of the initial length of the DNA. …”

MLLs bind to the human centromere repeats. by Kausika Kumar Malik (16462744)

“…(<b>H, J</b>) Chromatin immunoprecipitation (ChIP) analyzes showing decrease in levels of MLL (<b>H</b>) and SETD1A <b>(J)</b> at centromeric α-satellite loci following treatment of either MLL shRNA or SETD1A shRNA in HEK-293 cells, and the result plotted as percent input enrichment, are shown. …”

Rhesus macaque CD4 alleles are universally defective for HIV-1 entry. by Cody J. Warren (563898)

“…<p>(A) Total RNA was isolated from the blood of 52 rhesus macaque individuals. …”

Collective behavior in experimental data for validating model. by Giovanna De Palo (476510)

“…Rescaled NN distance was computed by normalizing NN distance by the average cell size. In order to decrease noise, profiles in the inset were smoothed with a moving average spanning 20 time points. …”

NOS network and reporters expression for cell lines grown 2i conditions. by Elsa Abranches (261932)

“…While, for both cell lines, <i>Oct4</i> and <i>Sox2</i> expression does not change significantly (p-value >0.10), both <i>VNP</i> and <i>Nanog</i> expression levels show a 2–3 fold increase (*p-value <0.03). This change is accompanied by a decrease in the expression levels of <i>Fgf5</i> and <i>Dusp6</i> when FGF/ERK signaling is abolished (**p-value <5.8×10⁻⁶). …”

Tn-Seq identifies genes required or detrimental for the growth of <i>S</i>. <i>aureus</i> under low pH. by Catrin M. Beetham (17797675)

“…The list of genes with a 2-fold decrease (essential genes) or a 2-fold increase (detrimental genes) in the number of transposon insertions and a Benjamini–Hochberg value of ≤ 0.1 were compared between libraries A and B and displayed in Venn diagrams for (E) pH 4.5 and (F) pH 5.5 stress conditions. …”

The Gc fusion loops. by Pablo Guardado-Calvo (2325709)

“…I) Acid-induced lipid mixing kinetics with liposomes of VLPs including Gn and wild type or mutant Gc. The decrease of pyrene-excimer fluorescence intensity was detected upon low pH incubation of pyrene-labeled VLPs with liposomes as a function of time. …”

Differentially regulated genes reside in closed chromatin regions and undergo dynamic changes in chromatin signature during fate transitions. by Ao Liu (481251)

“…Open regions are dark purple; closed regions are white. <b>(B)</b> Example of a shared bHLH target (SWEET5) that is nucleosome bound (MNase-seq [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002770#pbio.3002770.ref038" target="_blank">38</a>]; top track, deep blue), heavily H3K27me3-methylated in early stomatal lineage cells (H3K27me3 ChIP-seq in FAMA^LGK cells [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002770#pbio.3002770.ref037" target="_blank">37</a>]; second track, light blue) and shows a decrease in H3K27me3 in mature GCs (H3K27me3 ChIP-seq in GC [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002770#pbio.3002770.ref037" target="_blank">37</a>]; third track, green); the bottom 5 tracks show binding of the stomatal lineage bHLHs and the chromatin remodeler BRM from ChIP-seq experiments. …”

Seebeck Coefficients of Layered BiCuSeO Phases: Analysis of Their Hole-Density Dependence and Quantum Confinement Effect by Changhoon Lee (360362)

“…The observed <i>S</i>-vs-<i>p</i> relationship reflects the quantum confinement effect of uniform 1D chains, despite that the hole-doped BiCuSeO phases consist of 2D layers, (Cu₂Se₂)^2– and (Bi₂O₂)²⁺. The drastic decrease in the <i>S</i> values of Bi_1−δCuSeO with large δ (= 0.05, 0.075, 0.10) arises from the loss of the quantum confinement effect in the (Cu₂Se₂)^2– layers; that is, the uniform 1D chain character is lost because of their geometry distortion induced by a large number of Bi vacancies.…”

Table_1_Shaping of CD56bri Natural Killer Cells in Patients With Steroid-Refractory/Resistant Acute Graft-vs.-Host Disease via Extracorporeal Photopheresis.docx by Ming Ni (109558)

“…ECP therapy could significantly decrease CD56^briCD16⁻ NK cells with shifting the quality from a cytotoxic to a regulatory pattern and additionally mature CD56^dim NK cells via upregulation of CD57 in complete responding aGVHD patients. …”

Host translation initiation and ribosome networks suppress <i>Wolbachia</i> levels. by Yolande Grobler (5959106)

“…<p><b>(A)</b> The host translation initiation and ribosome networks identified by COMPLEAT and KEGG analysis are enriched for genes that increase <i>Wolbachia</i> levels when knocked down by RNAi in the primary screen. …”

Image_1_Shaping of CD56bri Natural Killer Cells in Patients With Steroid-Refractory/Resistant Acute Graft-vs.-Host Disease via Extracorporeal Photopheresis.TIF by Ming Ni (109558)

“…ECP therapy could significantly decrease CD56^briCD16⁻ NK cells with shifting the quality from a cytotoxic to a regulatory pattern and additionally mature CD56^dim NK cells via upregulation of CD57 in complete responding aGVHD patients. …”

Data_Sheet_1_Total Matrix Ca2+ Modulates Ca2+ Efflux via the Ca2+/H+ Exchanger in Cardiac Mitochondria.pdf by Gayathri K. Natarajan (9383882)

“…In Na⁺-free experimental buffer and with Ca²⁺ uptake inhibited, the rate of Ca²⁺ efflux and steady-state free matrix Ca²⁺ [mCa²⁺]_ss increased as the number of administered CaCl₂ boluses increased. ADP and cyclosporine A (CsA), which are known to increase Ca²⁺ buffering while maintaining a constant [mCa²⁺]_ss, decreased the rate of Ca²⁺ efflux via the CHE, with a significantly greater decrease in the presence of ADP. …”

DataSheet_1_Dynamic gut microbiota changes in patients with advanced malignancies experiencing secondary resistance to immune checkpoint inhibitors and immune-related adverse event... by Yanlin Zeng (14394801)

“…Significant changes in butyrate-producing bacteria were also presented in the SR cohort (P=0.043) with a decreasing trend upon secondary resistance occurrence (P=0.078). …”

Image_2_Shaping of CD56bri Natural Killer Cells in Patients With Steroid-Refractory/Resistant Acute Graft-vs.-Host Disease via Extracorporeal Photopheresis.tif by Ming Ni (109558)

“…ECP therapy could significantly decrease CD56^briCD16⁻ NK cells with shifting the quality from a cytotoxic to a regulatory pattern and additionally mature CD56^dim NK cells via upregulation of CD57 in complete responding aGVHD patients. …”

Intracellular LF82 multiplication requires stress responses. by Gaëlle Demarre (249248)

“…Horizontal lines indicate viability decrease by 2, 5 and 10 fold compared to WT LF82. Data were analyzed using a Student’s <i>t</i> test: * <i>P</i> <0.05, ** <i>P</i> <0.01, *** <i>P</i> <0.001, **** <i>P</i> <0.0001 (black stars correspond to mutant vs WT, blue stars correspond to mutant vs its complementation).…”

Seebeck Coefficients of Layered BiCuSeO Phases: Analysis of Their Hole-Density Dependence and Quantum Confinement Effect by Changhoon Lee (360362)

“…The observed <i>S</i>-vs-<i>p</i> relationship reflects the quantum confinement effect of uniform 1D chains, despite that the hole-doped BiCuSeO phases consist of 2D layers, (Cu₂Se₂)^2– and (Bi₂O₂)²⁺. The drastic decrease in the <i>S</i> values of Bi_1−δCuSeO with large δ (= 0.05, 0.075, 0.10) arises from the loss of the quantum confinement effect in the (Cu₂Se₂)^2– layers; that is, the uniform 1D chain character is lost because of their geometry distortion induced by a large number of Bi vacancies.…”

Modelling local immune dynamics during HPV infections. by Nicolas Tessandier (20355027)

“…<p>(A) Illustration of the parameters governing the descriptive models for a hypothetical case with two genotypes (<i>A</i> in dark blue and <i>B</i> in light blue) infecting an individual. …”