Additional file 1 of DNA methylation dynamics play crucial roles in shaping the distinct transcriptomic profiles for different root-type initiation in rice by Wei Jiang (14986)

“…Additional file 1. Fig. S1. Laser microdissection of initials of different root types. …”

Computational optimization of the circuits for specific functions further reveals general design principles. by Xiaojing Yang (154840)

“…<p>(A) The mathematical model of the switch illustrated. …”

Effect of the jitter for model SJ, and the spread width for model R on learning and detection. by Matthieu Gilson (153038)

“…When the pattern is presented (grey area), the soma potential rise is stronger for small , synonymous with more robust selectivity, even though detection does not completely collapse for larger values. To quantify the detection quality we used mutual information between pattern presentations and postsynaptic spikes (see Equation (26) in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1002231#s2" target="_blank">Materials and Methods</a>): the latter decreases with . …”

Early AMD-like degeneration in <i>Nrf2^−/−</i> mice. by Zhenyang Zhao (295966)

“…(D) Soft drusen-like deposits with larger size and ambiguous border. (E and F) Scotopic ERG recordings at +10 dB (25 cd·s/m²) flash intensity, showing significantly decreased a- and b-wave amplitudes in <i>Nrf2</i>^−/− mice when compared to age-matched wild-type mice (n = 6 per group; *<i>P</i><0.05, ** <i>P</i><0.01, Student's t-test).…”

The magnitude of the within-country mathematics and reading sex differences across performance. by Gijsbert Stoet (388802)

“…For students at the 50th percentile, girls reading advantage is about 37 points and increases for lower performing students and decreases for higher performing students. The relation between the two gaps within these countries is the same as found between countries (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0057988#pone-0057988-g002" target="_blank">Figure 2</a>). …”

Varying cell-cell adhesion in the original model, calibrated by the monolayer cell motilities, fails to match some experimental trends. by Jinghao Chen (5145005)

“…Similarly, a larger normalized edge length indicates a more featured wound while a smaller normalized edge length indicates a flatter or less featured wound. …”

Varying the diffusion coefficient in response to changes in cell-cell adhesion fails to match all the experimental trends. by Jinghao Chen (5145005)

“…Similarly, a larger normalized edge length indicates a more featured wound while a smaller normalized edge length indicates a flatter or less featured wound. …”

Pistachio production and crop quality comparisons between the US and Iran. by Travis R. Bui-Klimke (543086)

“…Iran once dominated exports; however, the US has closed the gap and exported a larger quantity of pistachios than Iran in 2009 <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0092149#pone.0092149-World1" target="_blank">[23]</a>. …”

Data_Sheet_1_Genome Size Variation and Evolution Driven by Transposable Elements in the Genus Oryza.xlsx by Shuang-feng Dai (11660431)

“…Our results showed that the species belonging to the same genome types had similar genome sizes, while genome sizes exhibited a gradually decreased trend during the evolutionary process in the clade with AA, BB, CC, and EE genome types. …”

Data_Sheet_1_Primary motor hand area corticospinal excitability indicates overall functional recovery after spinal cord injury.docx by Chun-Qiu Dai (16013315)

“…Background<p>After spinal cord injury (SCI), the excitability of the primary motor cortex (M1) lower extremity area decreases or disappears. A recent study reported that the M1 hand area of the SCI patient encodes the activity information of both the upper and lower extremities. …”

Formation of long-range interactions by insulator proteins. by Jutta Vogelmann (622973)

“…Binding of protein (red cylinder) to DNA lead to a larger molecular complex, with a corresponding increase in its diffusion time. …”

DataSheet_1_Environmental DNA metabarcoding of foraminifera for biological monitoring of bottom water and sediments on the Takuyo-Daigo Seamount in the northwestern Pacific.docx by Ayumi Maeda (5921258)

“…Sequences of foraminiferal DNA in sediment decreased linearly in core PC02-A1, but exponentially in core PC03-B3. …”

Intrinsic discriminability is determined by the interplay of the dynamic encoding and the free evolution. by Fabiano Baroni (234173)

“…For high frequency inputs, the dynamic encoding mechanism plays little role, and the points accumulate along a line. As the input frequency decreases, the input trains interact with the intrinsic oscillatory dynamics and the points distribute over a larger area in the phase space. …”

First step width results. by Aojun Jiang (17980035)

“…Participants in both groups exhibited decreases in first step width during Catch trials as a reaction to the unexpected absence of the Force Field, but these decreases were substantially larger for the Non-Perturbation group.…”

Phosphatidylcholine Alteration Identified Using MALDI Imaging MS in HBV-Infected Mouse Livers and Virus-Mediated Regeneration Defects by Eun-Sook Park (346119)

“…It is noteworthy that the expression of choline-phosphate cytidylyltransferase A (PCYT1A) was significantly delayed in wild type HBV-expressing livers. …”

Verification of the effect of various glucose concentrations on cytotoxicity and <i>in vitro</i> wound healing assay in primary cultured rat gingival fibroblasts. by Daisuke Kido (4710143)

“…The results revealed a significant cytotoxicity with incubation at 100 mM glucose concentration. …”

Long-term microwaving of denture base materials: effects on dimensional, color and translucency stability by Nick POLYCHRONAKIS (5376419)

“…Linear dimension, color change (ΔE*) and translucency parameter (TP) were measured at baseline and after certain intervals up to 224 cycles of immersion, using a digital calliper and a portable colorimeter. …”

Silicon Promotes Exodermal Casparian Band Formation in Si-Accumulating and Si-Excluding Species by Forming Phenol Complexes by Alexander T. Fleck (797352)

“…The exodermal suberin was decreased in rice and maize due to decreased amounts of aromatic suberin fractions. …”

Blood Pressure Modifies Retinal Susceptibility to Intraocular Pressure Elevation by Zheng He (137369)

“…Elevated intraocular pressure (IOP) is a risk factor for glaucoma and may reduce nutrient availability by decreasing ocular perfusion pressure (OPP). …”

Results of Scenario 2. Selection frequency of the respondents in sub-scenario. by Zhao Liu (582169)

“…Holding curative effects constant, the prices decreased in a, b, c, d, and e in turn; (iii) (c). …”