<i>Sln</i> deletion does not augment proteolytic activity and autophagic signaling in response to <i>Pln</i> overexpression. by Val A. Fajardo (497884)

“…<p>Calpain (A), caspase-3 (B), and 20S proteasome activity assays (C). …”

Read ratios for each gene (PA14 genome) in the PYO tolerance Tn-seq experiment. by Lucas A. Meirelles (10284499)

“…Ratios = reads + PYO conditions / reads no PYO condition (log₂ transformed), where high ratio values = increased fitness and low ratio values = decreased fitness. CIP Tn-seq values are from Cameron and colleagues [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3001093#pbio.3001093.ref024" target="_blank">24</a>] (see <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3001093#sec009" target="_blank">Methods</a>). …”

Patterns of mRNA expression in M-MuLV induced lymphomas. by Daniel A. Kuppers (227691)

“…Expression levels are relative to gene-specific means, and are displayed log2 scale of microarray spot intensities (green  =  decreased, red  =  increased). …”

Effect of indigo dye effluent on the growth, biomass production and phenotypic plasticity of Scenedesmus quadricauda(Chlorococcales) by MATHIAS A. CHIA (12683016)

“…The growth rate of the microalga decreased as indigo dye effluent concentration increased (p <0.05). …”

Effects of hormonal treatments on apoptosis in BALB/c-mammary glands by Karen A Dunphy (51802)

“…The hormone-stimulated group represents mammary tissues from mice treated with E+P and parous mice as described in Figure 2a. Bars indicate statistical differences between means: *< 0.05; **< 0.01.The incidence of mammary tumors was monitored in both nulliparous and multiparous BALB/c-female mice. …”

Differential expression of pattern forming genes during zebrafish spinal cord regeneration and validations of <i>pax6a</i>, <i>shhb</i> and <i>dbx2</i>. by Subhra Prakash Hui (510710)

“…Red and green colors represent increased and decreased expression respectively. B–D) Quantitative RT-PCR analysis of <i>pax6a</i>, <i>shhb</i> and <i>dbx2</i> respectively showing fold change and differential pattern of expression in various time points after injury and compared with the temporal expression patterns of microarray data. …”

Examples of c-Fos immunostaining images obtained from the granular RC of the NC (A), 3H-B, (B), and 3H-B/T (C) groups by light microscopy. by Xiaoping Du (284656)

“…Error bars represent standard error of the means. Scale bar in C = 500 µm for A-C.</p>…”

(A and B) HEK293 cells were transfected with htt (1–208 aa) containing 23Q or 130Q and scFv-EM48 ( scFv) by Chuan-En Wang (48485)

“…Cotransfection with a vector served as a control. SYTOX green staining of transfected HEK293 cells is shown in A, in which greater fluorescence is correlated with increased cell death. …”

Material released by CFDA-SE-labelled cercariae is phagocytosed by adherent MHC-II⁺ cells. by Ross A. Paveley (146889)

“…E; Addition of EGTA (5 mg/ml) or Cytochalasin D (10 ug/ml) significantly decreased uptake of CFDA-SE 0-3hRP. Representative plots are shown, bars are means±SEM where n = 6 mice.…”

Table_1_Probiotics, Prebiotics, and Synbiotics Improve Uremic, Inflammatory, and Gastrointestinal Symptoms in End-Stage Renal Disease With Dialysis: A Network Meta-Analysis of Rand... by Zixian Yu (8876978)

(A) Quantitative real-time RT-PCR assay did not show significant difference in mRNA level of between miR-17/20–transduced cells and control cells by Zuoren Yu (95071)

“…This experiment was repeated three times in triplicate. Data are mean ± SEM. (B) BLASTN analysis of human and mouse mRNAs identified a miR-17-5p– and miR-20a–binding site at the conserved 3′ UTR region. …”

Table_2_Probiotics, Prebiotics, and Synbiotics Improve Uremic, Inflammatory, and Gastrointestinal Symptoms in End-Stage Renal Disease With Dialysis: A Network Meta-Analysis of Rand... by Zixian Yu (8876978)

Table_1_Probiotics, Prebiotics, and Synbiotics Improve Uremic, Inflammatory, and Gastrointestinal Symptoms in End-Stage Renal Disease With Dialysis: A Network Meta-Analysis of Rand... by Zixian Yu (8876978)

Table_2_Probiotics, Prebiotics, and Synbiotics Improve Uremic, Inflammatory, and Gastrointestinal Symptoms in End-Stage Renal Disease With Dialysis: A Network Meta-Analysis of Rand... by Zixian Yu (8876978)

How Well Do Raters Agree on the Development Stage of <i>Caenorhabditis elegans</i>? by Annabel A. Ferguson (499778)

“…This study applies statistical modeling as a robust means of analyzing the performance of worm researchers measuring the stage of worm development in terms of the two independent factors that comprise “agreement”, which are (1) accuracy, representing trueness, a lack of systematic differences, or lack of bias, and (2) precision, representing reliability or the extent to which random differences are small. …”

ΔPMT mice are susceptible to the genotoxic and neurotoxic effects of acrylamide and glycidamide. by Kelsey A. Behrens (7901435)

“…Data analyzed by unpaired t-test between genotypes. Data represent means ± SEM, n = 4–6 (A, B), n = 5 (C, D), n = 10 (E), and n = 6–9 (F); * p < 0.05, ** p < 0.01; *** p < 0.001; **** p < 0.0001.…”

Acss2/Cbp/HIF-2α regulates HCT116 tumor cell properties. by Joseph A. Garcia (7865855)

“…Comparison of samples within a given condition on the day of interest for each experiment (colony formation, cell migration, cell invasion) was performed by one-way ANOVA followed by Dunnett’s multiple comparisons test using control shRNA knockdown/control rescue as reference with decreased samples noted (*, P<0.05). …”

Acss2/Cbp/HIF-2α regulates HT29 tumor cell properties. by Joseph A. Garcia (7865855)

“…Comparison of samples within a given condition on the day of interest for each experiment (colony formation, cell migration, cell invasion) was performed by one-way ANOVA followed by Dunnett’s multiple comparisons test using control shRNA knockdown/control rescue as reference with decreased samples noted (*, P<0.05). …”

HCV core protein efficiently mediates NLRP3 activation and IL-1β release in the reconstituted system. by Amina A. Negash (407310)

“…Data are represented as means +/- SD. For (A) *P = 0.0113. For (B) *P<0.05 and ***P<0.001.…”

K_eq and Φ of the α subunit. by Pallavi A. Bafna (271514)

“…<p>(A) Population analysis of Φ in the α subunit. Φ-values of 55 different residues plotted as a function of sequence position (≥2 mutants and >5-fold range in K_eq). …”