Data_Sheet_1_Climate Trends and Consumption of Foods and Beverages by Processing Level in Mexican Cities.docx by Nancy López-Olmedo (3435962)

“…We performed multilevel linear regression to estimate the association of annual change in rainfalls (for each 0.5 mm decrease) and temperatures (for each 0.1°C increase) at municipality level over the past 5 years with consumption of processed and unprocessed foods measured as the contribution to total energy intake. …”

Maternal pre-pregnancy obesity, offspring cord blood DNA methylation, and offspring cardiometabolic health in early childhood: an epigenome-wide association study by Chantel L. Martin (5451938)

“…Epigenetic alterations, such as in DNA methylation (DNAm), are a hypothesized link; however, sex-specific epigenomic targets remain unclear. …”

Model structure and performance. by Julia Caldwell (792878)

“…Cells were seeded at low (L), medium (M), and high (H) densities, and cultures were diluted using a linear scheme (D = 1) or the simple feedback algorithm (RTC). …”

The Genomic Landscape of the Ewing Sarcoma Family of Tumors Reveals Recurrent <i>STAG2</i> Mutation by Andrew S. Brohl (596305)

“…In an independent EFT tissue microarray cohort, we show that STAG2 loss as detected by immunohistochemistry may be associated with more advanced disease (p = 0.15) and a modest decrease in overall survival (p = 0.10). …”

Data_Sheet_1_Trends in enrollment, retention, and graduation of United States veterinary technicians/nurses schools.docx by Lori R. Kogan (6517547)

“…Forty-three percent of participants indicated a decrease in student enrollment in the last 5 years. …”

Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation by Nagarjuna Nagaraj (1296663)

“…Mass spectrometry (MS)-based proteomics now enables the analysis of thousands of phosphorylation sites in single projects. Among a wide range of analytical approaches, the combination of high resolution MS scans in an Orbitrap analyzer with low resolution MS/MS scans in a linear ion trap has proven to be particularly successful (“high-low” strategy). …”

Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation by Nagarjuna Nagaraj (1296663)

“…Mass spectrometry (MS)-based proteomics now enables the analysis of thousands of phosphorylation sites in single projects. Among a wide range of analytical approaches, the combination of high resolution MS scans in an Orbitrap analyzer with low resolution MS/MS scans in a linear ion trap has proven to be particularly successful (“high-low” strategy). …”

Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation by Nagarjuna Nagaraj (1296663)

“…Mass spectrometry (MS)-based proteomics now enables the analysis of thousands of phosphorylation sites in single projects. Among a wide range of analytical approaches, the combination of high resolution MS scans in an Orbitrap analyzer with low resolution MS/MS scans in a linear ion trap has proven to be particularly successful (“high-low” strategy). …”

Reaction network simulations and deriving stoichiometric subspaces. by Shu Wang (180520)

“…The remaining 7 eigenvectors before the gap, whose eigenvalues are not as small, span a log-linear space tilted away from the stoichiometric subspace by angles between <i>π</i>/6 ∼ <i>π</i>/3. …”

The results of the brain age monotonicity analysis for interval 3. by Siamak K. Sorooshyari (9014891)

“…<p>The histograms show the number of subjects classified as young and aged at every considered age. A 5-year sliding window was applied and a linear regression was fit to the results with intercept β₀ and slope β₁. …”

Concurrent validity of handgrip strength between the jamar and bulb dynamometers in women with rheumatoid arthitis by Lygia Paccini Lustosa (4650658)

“…Analysis showed that the measures between the two dynamometers were not concordant (bias = 9.04, p < 0.01), there was a linear relationship between the difference of the measures and the mean (r = 0.73, p < 0.01), and the limits of agreement were very extensive (−2.74 to 20.81). …”

Application to LF. by Giovanni Lo Iacono (101962)

“…</i> the piecewise zoonotic exposure <i>ζ</i> is linearly increasing up to March 2011 followed by a decrease up to January 2012). …”

Methane production of two roughage and total mixed ration as influenced by cellulase and xylanase enzyme addition by Belete Shenkute Gemeda (10442491)

“…Considering the efficiency of DM and neutral detergent fiber degradation and production of associated VFA with levels of enzymes, the use of 1 mg g−1 DM of enzyme can be a good option for the feeds tested. However, they cannot decrease methane production. …”

Estimated marginal means and confidence intervals for probability of snail consumption at trial time points (12 to 72 hrs at 12 hr intervals), superimposed on the lineartime trend... by Sara M. Faiad (16979350)

“…The linear trend is consistent with a ~9% decrease in the odds of snail consumption every 12 hours, indicative of a small but significant satiation effect (<i>e</i>^−0.008×12 = 0.91, t(432) = -4.2, p < 0.001, r = - 0.49).…”

Massively Parallel Implementation of Steered Molecular Dynamics in Tinker-HP: Comparisons of Polarizable and Non-Polarizable Simulations of Realistic Systems by Frédéric Célerse (6710519)

“…As it could be anticipated, strong discrepancies are noticed between polarizable and non-polarizable models when considered in vacuum, whereas results are more comparable when a water environment is added. However, for the largest system, i.e., the CD2CD58 complex, strong differences related to the modeling of a salt bridge are noticed exhibiting some potential issues with classical FFs. …”

Image 1_Expansion of CD57+ CD8 T cells in common variable immunodeficiency with hepatopathy and CMV infection.pdf by Patrick Bez (13168041)

“…</p>Results<p>The expansion of CD57⁺ CD8 T cells was part of the previously described immune alteration, including altered CD4/CD8 ratio and a decrease in naïve CD4 T cells. The loss of significant association with increasing age might corroborate the suggestion of premature immunosenescence in CVID. …”

Massively Parallel Implementation of Steered Molecular Dynamics in Tinker-HP: Comparisons of Polarizable and Non-Polarizable Simulations of Realistic Systems by Frédéric Célerse (6710519)

“…As it could be anticipated, strong discrepancies are noticed between polarizable and non-polarizable models when considered in vacuum, whereas results are more comparable when a water environment is added. However, for the largest system, i.e., the CD2CD58 complex, strong differences related to the modeling of a salt bridge are noticed exhibiting some potential issues with classical FFs. …”

Massively Parallel Implementation of Steered Molecular Dynamics in Tinker-HP: Comparisons of Polarizable and Non-Polarizable Simulations of Realistic Systems by Frédéric Célerse (6710519)

“…As it could be anticipated, strong discrepancies are noticed between polarizable and non-polarizable models when considered in vacuum, whereas results are more comparable when a water environment is added. However, for the largest system, i.e., the CD2CD58 complex, strong differences related to the modeling of a salt bridge are noticed exhibiting some potential issues with classical FFs. …”

Table 1_Expansion of CD57+ CD8 T cells in common variable immunodeficiency with hepatopathy and CMV infection.pdf by Patrick Bez (13168041)

“…</p>Results<p>The expansion of CD57⁺ CD8 T cells was part of the previously described immune alteration, including altered CD4/CD8 ratio and a decrease in naïve CD4 T cells. The loss of significant association with increasing age might corroborate the suggestion of premature immunosenescence in CVID. …”

Industrial Systems Biology of <i>Saccharomyces cerevisiae</i> Enables Novel Succinic Acid Cell Factory by José Manuel Otero (275619)

“…<div><p><i>Saccharomyces cerevisiae</i> is the most well characterized eukaryote, the preferred microbial cell factory for the largest industrial biotechnology product (bioethanol), and a robust commerically compatible scaffold to be exploitted for diverse chemical production. …”