Microscopy Image Dataset for Deep Learning-Based Quantitative Assessment of Pulmonary Vascular Changes by Aleksandr Sinitca (14513951)

Morpholino knockdown of <i>hjv</i> results in notochord and somite abnormalities. by Yann Gibert (232725)

“…Somites (arrows) in uninjected (<b>H</b>) and control morpholino-injected embryos (<b>I</b>) appeared V-shaped, while somites appeared U-shaped with decreased anterior-posterior dimension (distance between each pair of arrows) in <i>hjv</i> morphants (<b>J</b>). …”

PCR and WB of KLF8 after shRNA knockdown in U87-MG. by Oliver Schnell (187202)

“…(B) Subsequent Western Blot analysis of the nuclear fraction of KLF8-kd U87-MG cells on day 4 after seeding revealed that KLF8 protein was still detectable in all transfected U87-MG cells but only to a small extent in the KLF8-knockdown cells indicating that shRNA-knockdown was successful in these transfected cells in concordance with the qPCR results (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0030429#pone-0030429-g005" target="_blank">Figure 5A</a>).…”

Data Sheet 1_Based on quorum sensing: reverse effect of traditional Chinese medicine on bacterial drug resistance mechanism.pdf by Ningning Qiu (21524402)

“…Pathogenic bacteria utilize six principal resistance mechanisms: (1) Enzymatic degradation of antibiotics via the production of inactivating enzymes; (2) Inactivation of antibiotics by changing the drug targets; (3) Reduction of antibiotics entry by decreasing bacterial permeability; (4) Enhanced antibiotics efflux through overexpression of efflux pumps; (5) Acquisition of antibiotics resistance via genetic mutations; (6) Development of antibiotics resistance through formation of microbial biofilms. …”

Impact of frame shifts on tracking model performance. by Owen M. O’Connor (11965460)

“…<p>The average prediction in the four cardinal directions to ground truth overlap for 20 representative tracking events plotted as a function of the shift distance. Tracking model performance when <b>(A)</b> cell density is low (<5 cells in the frame), <b>(B)</b> medium (20–25 cells in the frame), or <b>(C)</b> high (>200 cells in the frame). …”

E-cigarettes (2.4% nicotine) plus HFD inactivates AMPK. by Kamrul M. Hasan (9450158)

“…GAPDH in the immunoblot is shown as a loading control. P<0.05. Values are given as means ± SE of 5 mice per group. * P<0.05.…”

Oxidation of surface carbohydrates increases CCL28 binding. by David L. Erickson (30603)

“…(B) Removal of surface proteins from the <i>hldD</i>::Tn5 mutant strain by proteinase K treatment decreases CCL28 binding (***p = 0.0001 by unpaired T-test) relative to the untreated samples.…”

Data_Sheet_1_Tulathromycin metaphylaxis increases nasopharyngeal isolation of multidrug resistant Mannheimia haemolytica in stocker heifers.zip by William B. Crosby (13248210)

“…<p>Bovine respiratory disease (BRD) is a leading cause of disease in feedlot and stocker calves with Mannheimia haemolytica (MH) as one of the most common etiologies. …”

Hormone-sensitive BCa cells (MCF-7) comprise 3 subpopulations, distinguished by ER-α46 expression levels. by John J. Kim (11191609)

“…<p><b>A</b> False-color micrographs of MCF-7 Cell Types: (1) ER-α66⁺ ∩ ER-α46⁺, (2) ER-α66⁺ ∩ ER-α46^-, and (3) ER-α66^- ∩ ER-α46^-. …”

Data_Sheet_1_In vitro and in vivo Virulence Potential of the Emergent Species of the Acinetobacter baumannii (Ab) Group.xlsx by Clara Cosgaya (7536140)

“…In this study 76 isolates of 5 species within the Ab group (A. baumannii n = 16, A. lactucae n = 12, A. nosocomialis n = 16, A. pittii n = 20, and A. seifertii n = 12), were compared in terms of antimicrobial susceptibility, carriage of intrinsic resistance genes, biofilm formation, and the ability to kill Caenorhabditis elegans in an infection assay. …”

Table_1_In vitro and in vivo Virulence Potential of the Emergent Species of the Acinetobacter baumannii (Ab) Group.pdf by Clara Cosgaya (7536140)

“…In this study 76 isolates of 5 species within the Ab group (A. baumannii n = 16, A. lactucae n = 12, A. nosocomialis n = 16, A. pittii n = 20, and A. seifertii n = 12), were compared in terms of antimicrobial susceptibility, carriage of intrinsic resistance genes, biofilm formation, and the ability to kill Caenorhabditis elegans in an infection assay. …”

Image_1_In vitro and in vivo Virulence Potential of the Emergent Species of the Acinetobacter baumannii (Ab) Group.tif by Clara Cosgaya (7536140)

“…In this study 76 isolates of 5 species within the Ab group (A. baumannii n = 16, A. lactucae n = 12, A. nosocomialis n = 16, A. pittii n = 20, and A. seifertii n = 12), were compared in terms of antimicrobial susceptibility, carriage of intrinsic resistance genes, biofilm formation, and the ability to kill Caenorhabditis elegans in an infection assay. …”

Data_Sheet_2_In vitro and in vivo Virulence Potential of the Emergent Species of the Acinetobacter baumannii (Ab) Group.xlsx by Clara Cosgaya (7536140)

“…In this study 76 isolates of 5 species within the Ab group (A. baumannii n = 16, A. lactucae n = 12, A. nosocomialis n = 16, A. pittii n = 20, and A. seifertii n = 12), were compared in terms of antimicrobial susceptibility, carriage of intrinsic resistance genes, biofilm formation, and the ability to kill Caenorhabditis elegans in an infection assay. …”

Regions showing significant differences in functional connectivity to the left DLPFC (Up) and right DLPFC (Down) between MCI patients and healthy controls (with GM correction). by Peipeng Liang (212900)

“…<p>For the details of the regions, see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0022153#pone-0022153-t004" target="_blank">Table 4</a> and <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0022153#pone-0022153-t005" target="_blank">Table 5</a>. …”

CD8+ T lymphocytes in the course of dengue fever. by Andréia Manso de Matos (244954)

“…A significant change in the percentage of CD8+ T lymphocytes was observed, between days 5 and 6 after the onset of symptoms when compared to healthy controls and days 3 and 4 of symptoms, as shown in A. …”

Analysis of the trabecular bone structure of 8 week old femurs from female and male, CN and STAT3-cKO mice. by Rebecca K. Davidson (9188593)

“…<p>A) Three-dimensional models of a 0.5 mm thick trabecular bone area 1mm proximal from the growth plate. …”

Trib2 does not suppress the initiation of MLL-AF9-driven myeloid leukemia. by Sarah J. Stein (3168600)

“…Mice with a body condition score of ≤2 and decreased mobility were euthanized (n = 5 per group). …”

Frequency distribution of depths of coverage (DP) and allele balances (AB). by Eileen Marie Hanna (9693992)

“…The depth of coverage distribution is shown to have its mode around 40x after which the frequency keeps decreasing. The allele balances of the heterozygous variants vary around a maximum frequency of 0.5, while the balances of the homozygous variants are at the single line at value 1.…”

Co-localisation of Runx1t1 and OX42 in the postnatal rat brain by double immunofluorescent staining. by Nimmi Baby (524594)

“…<p>Confocal images showing the expression of Runx1t1 (B,E,H,K,N,Q; red) in OX42-positive (A,D,G,J,M,P; green) microglia (C,F,I,L,O,R; yellow) from the corpus callosum of 1, 3, 5,7, 14& 21 days rat brains, respectively. …”

Inclusion of helper images improves precision at the expense of recall. by Jenny M. Vo-Phamhi (11250803)