Showing 1 - 15 results of 15 for search '(( a virus design optimization algorithm ) OR ( binary wave driven optimization algorithm ))', query time: 0.59s Refine Results
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    A high-performance and highly reusable fast multipole method library and its application to solvation energy calculations at virus-scale by Tingyu Wang (12342757)

    Published 2022
    “…We created a high-level Python interface with a modest effort due to a straightforward and standard software design. …”
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    Data_Sheet_1_Strategies targeting hemagglutinin cocktail as a potential universal influenza vaccine.ZIP by Xuejie Liu (6755330)

    Published 2022
    “…In this study, we optimized the HA sequences of human seasonal influenza viruses (H1N1, H3N2, Victoria, and Yamagata) by designing multivalent vaccine antigen sets using a mosaic vaccine design strategy and genetic algorithms, and designed an HA mosaic cocktail containing the most potential CTL epitopes of seasonal influenza viruses. …”
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    Data_Sheet_3_Deciphering the Subtype Differentiation History of SARS-CoV-2 Based on a New Breadth-First Searching Optimized Alignment Method Over a Global Data Set of 24,768 Sequen... by Qianyu Lin (4687312)

    Published 2021
    “…Here, we optimized multiple sequence alignment using a conserved sequence search algorithm to align 24,768 sequences from the GISAID data set. …”
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    Data_Sheet_4_Deciphering the Subtype Differentiation History of SARS-CoV-2 Based on a New Breadth-First Searching Optimized Alignment Method Over a Global Data Set of 24,768 Sequen... by Qianyu Lin (4687312)

    Published 2021
    “…Here, we optimized multiple sequence alignment using a conserved sequence search algorithm to align 24,768 sequences from the GISAID data set. …”
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    Data_Sheet_2_Deciphering the Subtype Differentiation History of SARS-CoV-2 Based on a New Breadth-First Searching Optimized Alignment Method Over a Global Data Set of 24,768 Sequen... by Qianyu Lin (4687312)

    Published 2021
    “…Here, we optimized multiple sequence alignment using a conserved sequence search algorithm to align 24,768 sequences from the GISAID data set. …”
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    Data_Sheet_1_Deciphering the Subtype Differentiation History of SARS-CoV-2 Based on a New Breadth-First Searching Optimized Alignment Method Over a Global Data Set of 24,768 Sequen... by Qianyu Lin (4687312)

    Published 2021
    “…Here, we optimized multiple sequence alignment using a conserved sequence search algorithm to align 24,768 sequences from the GISAID data set. …”
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    Data_Sheet_6_Deciphering the Subtype Differentiation History of SARS-CoV-2 Based on a New Breadth-First Searching Optimized Alignment Method Over a Global Data Set of 24,768 Sequen... by Qianyu Lin (4687312)

    Published 2021
    “…Here, we optimized multiple sequence alignment using a conserved sequence search algorithm to align 24,768 sequences from the GISAID data set. …”
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    Data_Sheet_5_Deciphering the Subtype Differentiation History of SARS-CoV-2 Based on a New Breadth-First Searching Optimized Alignment Method Over a Global Data Set of 24,768 Sequen... by Qianyu Lin (4687312)

    Published 2021
    “…Here, we optimized multiple sequence alignment using a conserved sequence search algorithm to align 24,768 sequences from the GISAID data set. …”
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    Biochemistry-informed design selects potent siRNAs against SARS-CoV-2 by Élisabeth Houbron (16022350)

    Published 2023
    “…While previous siRNA design algorithms tended to rely on simplistic strategies (raising fully complementary siRNAs against targets of interest), our approach uses the most up-to-date mechanistic description of RNAi to allow mismatches at tolerable positions and to force them at beneficial positions, while optimizing siRNA duplex asymmetry. …”
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    Data_Sheet_1_Phase-wise evaluation and optimization of non-pharmaceutical interventions to contain the COVID-19 pandemic in the U.S..pdf by Xiao Zhou (122661)

    Published 2023
    “…We further assess the effectiveness of existing COVID-19 control measures and explore potential optimal strategies that strike a balance between public health and socio-economic recovery for individual states in the U.S. by employing the Pareto optimality and genetic algorithms. …”