Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics by Paolo Cifani (1575613)

“…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …”

Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics by Paolo Cifani (1575613)

“…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …”

Design and implementation of DelaySSA. The input data for DelaySSA are reaction information, initial states, parameters and delays. Combining these into the simulation function, th... by Ziyan Jin (21021976)

Algorithmic differentiation improves the computational efficiency of OpenSim-based trajectory optimization of human movement by Antoine Falisse (6061601)

“…<div><p>Algorithmic differentiation (AD) is an alternative to finite differences (FD) for evaluating function derivatives. …”

Modeling with uniform <i>σ</i> values. by Giacomo Janson (8138517)

Effect of <i>|Δd</i>_<i>n</i><i>|</i> perturbation on 3D modeling. by Giacomo Janson (8138517)

Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling by Giacomo Janson (8138517)

“…This program implements the “modeling by satisfaction of spatial restraints” strategy and its core algorithm has not been altered significantly since the early 1990s. …”

Example of use of the slightly off-axis strategies. by Raul Castañeda (13932971)

Example of the fully-compensated phase reconstruction package for off-axis DHM holograms recorded in telecentric configuration. by Raul Castañeda (13932971)

PATH has state-of-the-art performance versus previous binding affinity prediction algorithms. by Yuxi Long (11024307)

“…<p>^<b>a</b>PATH⁺ shows comparable or better performance with less overfitting, as evidenced by a smaller slope, with much less increase in RMSEs beyond the training dataset, compared to established binding affinity prediction algorithms spanning a variety of methods. …”

Number of offspring as a function of the number of mismatches for the best couple (blue) and the second-best couple (red) found by APIS parentage assignment. by Julien Roche (611898)

Comparison of edge detector and CHT in detecting droplets. by Manibarathi Vaithiyanathan (6655274)

Schematic diagram of weld surface defects. by Xiangqian Xu (17310895)

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Improved YOLOv7 network structure. by Xiangqian Xu (17310895)

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Renderings of data enhancements. by Xiangqian Xu (17310895)

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Schematic diagram of feature fusion of small-size target detection head. by Xiangqian Xu (17310895)

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The calculation amount of depthwise Separable Convolution. by Xiangqian Xu (17310895)

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Number and size of marked defects. by Xiangqian Xu (17310895)

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Precision-Recall curve. by Xiangqian Xu (17310895)

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Comparison experiment results. by Xiangqian Xu (17310895)

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