EFGs: A Complete and Accurate Implementation of Ertl’s Functional Group Detection Algorithm in RDKit by Gonzalo Colmenarejo (650249)

“…In this paper, a new RDKit/Python implementation of the algorithm is described, that is both accurate and complete. …”

Local topological scales of hierarchical community organization in structural and functional brain graphs. by Arian Ashourvan (6685232)

Multi-scale detection of hierarchical community architecture in structural and functional brain networks by Arian Ashourvan (6685232)

“…<div><p>Community detection algorithms have been widely used to study the organization of complex networks like the brain. …”

An expectation-maximization algorithm for finding noninvadable stationary states. by Robert Marsland (8616483)

“…<i>(c)</i> Pseudocode for self-consistently computing <b>R</b>* and , which is identical to standard expectation-maximization algorithms employed for problems with latent variables in machine learning.…”

Results of the application of different clustering algorithms to average functional connectivity from healthy subjects. by Francisco Páscoa dos Santos (16510676)

“…<p>A) Resulting cluster inertia from applying the k-means algorithm described in the methods to empirical averaged functional connectivity from healthy subjects, with different numbers of clusters. …”

Application of the algorithm to unseen data. Presynaptic neurons labelled by rabies viral injection into layer 2/3 primary visual cortex in Penk-Cre mice. by Adam L. Tyson (10892822)

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Listed python codes of our algorithm with explanations (Python 3.9 recommended). by Takayuki Niizato (162226)

Similarity between the allegiance matrices of the multiplex SC-FC graph, the FC graph alone, and the SC graph alone, as a function of the topological scale for the group. by Arian Ashourvan (6685232)

BCI architecture. by Stefan K. Ehrlich (6475490)

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Exploration of Bioinspired Algorithms in Multithreshold Image Segmentation for Medical Images by Fernando Ramírez sarmiento (18359679)

“…<p dir="ltr">The brain is essential for human functioning, but it is vulnerable to multiple pathologies, including strokes, brain tumors, and other disorders that compromise its structure and function. …”

Total number of cells in each region, per brain, projecting to layer 2/3 neurons in primary visual cortex. by Adam L. Tyson (10892822)

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Illustration of the cell detection process. by Adam L. Tyson (10892822)

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Python-based Monte Carlo Simulation Tool by Yangfan Jiang (9372782)

Variations of loss functions versus epoch number. by Xueliang Guo (4797057)

Python-Based Algorithm for Estimating NRTL Model Parameters with UNIFAC Model Simulation Results by Se-Hee Jo (20554623)

“…This algorithm conducts a series of procedures: (1) fragmentation of the molecules into functional groups from SMILES, (2) calculation of activity coefficients under predetermined temperature and mole fraction conditions by employing universal quasi-chemical functional group activity coefficient (UNIFAC) model, and (3) regression of NRTL model parameters by employing UNIFAC model simulation results in the differential evolution algorithm (DEA) and Nelder–Mead method (NMM). …”

Automatic cropping algorithm. by Thomas W Georgi (12427189)

<b>Opti2Phase</b>: Python scripts for two-stage focal reducer by Morgan Najera (21540776)

“…</li></ul><p dir="ltr">The scripts rely on the following Python packages. Where available, repository links are provided:</p><ol><li><b>NumPy</b>, version 1.22.1</li><li><b>SciPy</b>, version 1.7.3</li><li><b>PyGAD</b>, version 3.0.1 — https://pygad.readthedocs.io/en/latest/#</li><li><b>bees-algorithm</b>, version 1.0.2 — https://pypi.org/project/bees-algorithm</li><li><b>KrakenOS</b>, version 1.0.0.19 — https://github.com/Garchupiter/Kraken-Optical-Simulator</li><li><b>matplotlib</b>, version 3.5.2</li></ol><p dir="ltr">All scripts are modular and organized to reflect the design stages described in the manuscript.…”

Data_Sheet_1_Resting-State Functional Connectivity Estimated With Hierarchical Bayesian Diffuse Optical Tomography.docx by Takatsugu Aihara (4433524)

“…We recently proposed a hierarchical Bayesian (HB) DOT algorithm and verified its performance in terms of task-related brain responses. …”

PyNoetic’s stimuli generation and recording module, which supports both ERP and SSVEP. by Gursimran Singh (575288)

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Both Ankle fNIRS MI dataset by Hammad Gilani (8060012)

“…<br></li></ul><p dir="ltr">This dataset can be used to explore neural signatures of lower limb motor imagery, develop brain-computer interface (BCI) algorithms, and investigate cortical hemodynamics associated with motor planning and control.…”