Comparison of BLAST, DeepGO-Seq and PFP-WGAN on dataset 1. حسب Seyyede Fatemeh Seyyedsalehi (10196767)

الموضوعات:

Sensitivity of the PFP-WGAN on parameter λ₁. حسب Seyyede Fatemeh Seyyedsalehi (10196767)

الموضوعات:

Three term-centric measures suitable for unbalanced data. حسب Seyyede Fatemeh Seyyedsalehi (10196767)

الموضوعات:

ADT: A Generalized Algorithm and Program for Beyond Born–Oppenheimer Equations of “<i>N</i>” Dimensional Sub-Hilbert Space حسب Koushik Naskar (7510592)

"…In order to overcome such shortcoming, we develop a generalized algorithm, “ADT” to generate the nonadiabatic equations through symbolic manipulation and to construct highly accurate diabatic surfaces for molecular processes involving excited electronic states. …"

Top-ranked hub genes identified by 5 cytoHubba algorithms. حسب Jun Li (6494)

NRPStransformer, an Accurate Adenylation Domain Specificity Prediction Algorithm for Genome Mining of Nonribosomal Peptides حسب Zhihan Zhang (1403308)

"…Leveraging the sequences within the flavodoxin-like subdomain, we developed a substrate specificity prediction algorithm using a protein language model, achieving 92% overall prediction accuracy for 43 frequently observed amino acids, significantly improving the prediction reliability. …"

Dynamical comparison between Drosha and Dicer reveals functional motion similarities and dissimilarities حسب Rotem Aharoni (8108177)

"…Since dynamics is essential for protein function, a comparison at their dynamics level is fundamental for a complete understanding of the overall relations between these proteins. …"

Supplementary Files 1-11 from Protein Signatures of NK Cell–Mediated Melanoma Killing Predict Response to Immunotherapies حسب Sabrina Cappello (14950324)

Morpheus: A fragment-based algorithm to predict metamorphic behaviour in proteins across proteomes حسب Vijay Subramanian (20718933)

"…<p dir="ltr">Supplementary material for Morpheus: A fragment-based algorithm to predict metamorphic behaviour in proteins across proteomes.…"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta حسب Morgan L. Nance (10981871)

"…These highly diverse chains are recognized by a variety of protein receptors, enabling glycans to regulate many biological functions. …"

Computational predictions in the protein-protein interface of the c-Raf-RBD:KRas complex for c-Raf-RBD(RK) and the novel variant c-Raf-RBD(RKY). حسب Anna U. Lowegard (8051597)

الموضوعات:

Results of the application of different clustering algorithms to average functional connectivity from healthy subjects. حسب Francisco Páscoa dos Santos (16510676)

"…<p>A) Resulting cluster inertia from applying the k-means algorithm described in the methods to empirical averaged functional connectivity from healthy subjects, with different numbers of clusters. …"

PathOlOgics_RBCs Python Scripts.zip حسب Ahmed Elsafty (16943883)

Functional enrichment analysis for known genes in AAAKB. حسب Di Yao (5145401)

Genetic Algorithm for Automated Parameterization of Network Hamiltonian Models of Amyloid Fibril Formation حسب Gianmarc Grazioli (6752297)

الموضوعات:

Flexible CDOCKER: Hybrid Searching Algorithm and Scoring Function with Side Chain Conformational Entropy حسب Yujin Wu (2901128)

"…The binding of small-molecule ligands to protein or nucleic acid targets is important to numerous biological processes. …"