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Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics
منشور في 2021"…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …"
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Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics
منشور في 2021"…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …"
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Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements
منشور في 2021"…<div>This directory contains Python 3 scripts implementing the Trajectory Adaptive Multilevel Sampling algorithm (TAMS), a variant of Adaptive Multilevel Splitting (AMS), for the study of rare events. …"
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Differential analysis between the high- and low-risk score groups and functional analyses of DEGs.
منشور في 2024الموضوعات: -
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Table_4_A Comparative Study of Cluster Detection Algorithms in Protein–Protein Interaction for Drug Target Discovery and Drug Repurposing.xlsx
منشور في 2019"…The topological modules generated by a computational approach are defined as functional clusters. However, the functions inferred for these topological modules extracted from a large-scale molecular interaction network, such as a protein–protein interaction (PPI) network, could differ depending on different cluster detection algorithms. …"
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Table_1_A Comparative Study of Cluster Detection Algorithms in Protein–Protein Interaction for Drug Target Discovery and Drug Repurposing.DOCX
منشور في 2019"…The topological modules generated by a computational approach are defined as functional clusters. However, the functions inferred for these topological modules extracted from a large-scale molecular interaction network, such as a protein–protein interaction (PPI) network, could differ depending on different cluster detection algorithms. …"
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EFGs: A Complete and Accurate Implementation of Ertl’s Functional Group Detection Algorithm in RDKit
منشور في 2025"…In this paper, a new RDKit/Python implementation of the algorithm is described, that is both accurate and complete. …"
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The optimal solution set of NYN by using different algorithms.
منشور في 2022الموضوعات: "…evolutionary genetic algorithm…"