Table3_Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features.XLSX حسب Lei Chen (54296)

"…In this study, the protein–protein interaction network, functional annotation of proteins and a group of direct proteins with known subcellular localization were used to construct models. …"

Table4_Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features.XLSX حسب Lei Chen (54296)

"…In this study, the protein–protein interaction network, functional annotation of proteins and a group of direct proteins with known subcellular localization were used to construct models. …"

Table1_Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features.XLSX حسب Lei Chen (54296)

"…In this study, the protein–protein interaction network, functional annotation of proteins and a group of direct proteins with known subcellular localization were used to construct models. …"

Analysis of the limit cases of the sampling function. حسب Greta Grassmann (12418506)

الموضوعات:

Test to find best k-tuple algorithm settings. حسب Elzbieta Rembeza (5114207)

Immune infiltration analysis by CIBERSORT algorithm. حسب Lanying Shen (22755930)

The GOR4 and SOPMA algorithm findings. حسب Ahmad Abdullah Mahdeen (19704401)

Immune infiltration analysis by CIBERSORT algorithm. حسب Lanying Shen (22755930)

Root mean square fluctuation (RMSF) of the backbone atoms of the protein as a function of each amino acid residue. حسب L. F. S. Bonet (11502082)

Listed python codes of our algorithm with explanations (Python 3.9 recommended). حسب Takayuki Niizato (162226)

Genetic algorithms can be applied to higher-dimensional design problems. حسب Lu Hong (399882)

الموضوعات:

Demonstration of the combinatorial Hill functions (A and B), and the regulation function (C and D) under the regulation of an activator and a repressor. حسب Ruihao Li (2908991)

A comparison of visual tools for the exploration of biomolecular networks. حسب Paolo Perlasca (9909695)

الموضوعات:

2025-01-14 - PAG Talk - Kmerseek - Olga Botvinnik - Seanome حسب Olga Botvinnik (20571431)

الموضوعات:

Fraction of selective neurons as a function of the imaging signal-to-noise ratio. حسب Ziqiang Wei (5953964)

Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics حسب Paolo Cifani (1575613)

"…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …"

Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics حسب Paolo Cifani (1575613)

"…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …"

(a-b) The LASSO algorithm was used for hyperparameter tuning and identification of the important predictive features. حسب Devi Soorya Narayana Sasikumar (22331743)

الموضوعات:

MEDOC: A Fast, Scalable, and Mathematically Exact Algorithm for the Site-Specific Prediction of the Protonation Degree in Large Disordered Proteins حسب Martin J. Fossat (3714079)

الموضوعات: "…mathematically exact algorithm…"

Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling حسب Giacomo Janson (8138517)

"…Secondly, we have inquired into how the incorporation of statistical potential terms (such as the DOPE potential) in the MODELLER’s objective function impacts positively 3D modeling quality by providing a small but consistent improvement in metrics such as GDT-HA and lDDT and a large increase in stereochemical quality. …"