EFGs: A Complete and Accurate Implementation of Ertl’s Functional Group Detection Algorithm in RDKit by Gonzalo Colmenarejo (650249)

“…In this paper, a new RDKit/Python implementation of the algorithm is described, that is both accurate and complete. …”

Example of landmark registration to align ‘peaks’ of high density in the probability density function (PDF) of CD4 expression on blood T cells for a target distribution and chosen... by Ross J. Burton (10941910)

Results of the application of different clustering algorithms to average functional connectivity from healthy subjects. by Francisco Páscoa dos Santos (16510676)

“…<p>A) Resulting cluster inertia from applying the k-means algorithm described in the methods to empirical averaged functional connectivity from healthy subjects, with different numbers of clusters. …”

Python-Based Algorithm for Estimating NRTL Model Parameters with UNIFAC Model Simulation Results by Se-Hee Jo (20554623)

“…A Python-based algorithm was developed for estimating the nonrandom two-liquid (NRTL) model parameters of aqueous binary systems in a straightforward manner from simplified molecular-input line-entry specification (SMILES) strings of substances in a system. …”

A hybrid algorithm based on improved threshold function and wavelet transform. by Bingbing Li (461702)

Subjects:

FAR-1: A Fast Integer Reduction Algorithm Compared to Collatz and Half-Collatz by Faizan Ali (21689861)

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“trend+var” algorithm. by Roman Olson (6577004)

Performance as a function of the number of algorithm executions for the full-sized matrix design. by Jörg Felder (5848541)

“…<p>Performance as a function of the number of algorithm executions for the full-sized matrix design.…”

Implementation algorithm. by Michael A. Colman (7163735)

Efficient algorithms to discover alterations with complementary functional association in cancer by Rebecca Sarto Basso (6728921)

“…We provide analytic evidence of the effectiveness of UNCOVER in finding high-quality solutions and show experimentally that UNCOVER finds sets of alterations significantly associated with functional targets in a variety of scenarios. In particular, we show that our algorithms find sets which are better than the ones obtained by the state-of-the-art method, even when sets are evaluated using the statistical score employed by the latter. …”

Python-based Monte Carlo Simulation Tool by Yangfan Jiang (9372782)

<b>Opti2Phase</b>: Python scripts for two-stage focal reducer by Morgan Najera (21540776)

“…</p><p dir="ltr">The package includes:</p><ul><li>Scripts for first-order analysis, third-order modeling, optimization using a Physically Grounded Merit Function (PGMF), and RMS-based refinement.…”

Adaptive H-REMD simulation algorithm. by Danial Pourjafar-Dehkordi (7165523)

Algorithm pseudocode. by Cheng-jie Chen (22272090)

Subjects: “…Cell Biology…”

A Python Package for the Localization of Protein Modifications in Mass Spectrometry Data by Anthony S. Barente (14035175)

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Skeletonisation algorithm. by Jordan Hembrow (16908051)

Change of ITAE objective function for en-CSA, CSA, RUN, PDO and RIME algorithms. by Sarah A. Alzakari (19704611)

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Algorithm testing. by Ziad M. Ali (12516532)

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Comparison of deconvolution and optimization algorithms on a batch of data. by Ali-Kemal Aydin (10968731)

“…Both experimental data have been resampled at 50ms and used to compute a set of TFs (in orange) either with direct deconvolution approaches (Fourier or Toeplitz methods, middle-upper panel TFs) or with 1-Γ function optimization performed by 3 different algorithms (middle-lower panel TFs). …”

An expectation-maximization algorithm for finding noninvadable stationary states. by Robert Marsland (8616483)

“…<i>(b)</i> Metabolic byproducts move the relevant unperturbed state from <b>R</b>⁰ (gray ‘x’) to (black ‘x’), which is itself a function of the current environmental conditions. …”