Construction of the PRG score index using integrated machine learning algorithms. by Xiangxin Wu (22320058)

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The eVIP algorithm uses RNA-seq data to predict the function of somatic mutations. by Alexis M. Thornton (11068403)

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The Precision-Recall curve of both the models. by Aastha Vatsyayan (9981916)

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Algorithm framework. by Zongjin Li (38031)

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Comparison of results of different algorithms. by Zhongzhong Guo (12133402)

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Algorithm flow of the CNN + LSTM model. by Zhongzhong Guo (12133402)

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Efficient algorithms to discover alterations with complementary functional association in cancer by Rebecca Sarto Basso (6728921)

“…We provide analytic evidence of the effectiveness of UNCOVER in finding high-quality solutions and show experimentally that UNCOVER finds sets of alterations significantly associated with functional targets in a variety of scenarios. In particular, we show that our algorithms find sets which are better than the ones obtained by the state-of-the-art method, even when sets are evaluated using the statistical score employed by the latter. …”

NLDock: a Fast Nucleic Acid–Ligand Docking Algorithm for Modeling RNA/DNA–Ligand Complexes by Yuyu Feng (11371729)

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Comparison of the performance of both models against 13 other models on the independent test dataset. by Aastha Vatsyayan (9981916)

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ROC curves of CNN + LSTM model and traditional algorithms. by Zhongzhong Guo (12133402)

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WGCNA and machine learning algorithms. by Shushu Wang (6870191)

Functional effect prediction of FUS mutations by ten nsSNP prediction algorithms. by L. F. S. Bonet (11502082)

Functional enrichment of gene clusters identified in up-regulated drought tolerant network (uDTN) using MCL algorithm. by Sanchari Sircar (198485)

Statistics table for ED algorithm and SNP-index algorithm association regions. by Jiaqi Li (220961)

Bioinformatic Analysis Reveals both Oversampled and Underexplored Biosynthetic Diversity in Nonribosomal Peptides by Bo-Siyuan Jian (14669996)

Subjects: “…structural prediction algorithms…”

Functional enrichment of 17 gene clusters identified in down-regulated drought tolerant network (dDTN) using MCL algorithm. by Sanchari Sircar (198485)

Identification of hub genes with six different algorithms using the CytoHubba plugin in Cytoscape. by Ramin Yousefpour Shahrivar (20903161)

Algorithmic assessment reveals functional implications of GABRD gene variants linked to idiopathic generalized epilepsy by Ayla Arslan (17943365)

“…</p> <p>The study employs a combination of in silico algorithms to analyze 82 variants of unknown clinical significance of GABRD gene sourced from the ClinVar database. …”

Visualization of the RITSS algorithm. by Julian Hecker (758791)

Standard functions to test. by Kemal Gökhan Nalbant (18858009)